Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01230 AAAATGACAAGCATGGCACGCACATAGAGATAACAAAACAGCCCAAGAAGGTGGTGGAAGGGAAGAACAGACGAAACAAAACAAAACAGCCACCGCCAATTGGGAGAAGAACAGTGTTTAGGAAGACAGAGACTGAGAATTGCAAAGGGTTGGTTGGTTTTTGGCCATGGCGATGCGCGACCTCGTTTCGGGCTCCGCCGCGTGTGGCGACTCTTCTTCTTCCTCCTCCGCTAACCCTCTCGCTTCCCTCGCCAACGCCCTTATTGGCTCTTCCTCCAAAACTCAGGAGAGGTTGAAGGAGATTCCTACATCCACTCTTACTGATCCTGGCTCGCAATTTTACTCAACGACTCTTCCTGCCAATCACCTTCCTGGCTCTGAGCTCGATAAGCCTCTTTTGGATGCAAACTCTCAGGCTTCGGAGTTTTTGCATAGGTTTCGTGGCACCACTGGGCTTGAGGAGACGTGGGATGAGATACAGCGTGAGGGGACGCCGCAAAGAGTTCTATCGAACTTTTTGCACCAGTTTCTTGATAGCAGCCGTGGTGGAGTGCCTTTTCATCCTGCCCCACTTCCAATGCTGGGTTTATCTGAAGGTGATAAACAATGCATACGGGACCGCAGCAGCATAATGGCCAGGCATCTCTTTGCCGATAAAAGTGAAGAATTTATTGATGCTCAAGTAAATGCACTTCTATGCTCTCTAGATATTGACAGCAATGTCCGTGGTAAGGGACCTATGCCTGAAAGATTTCGGGAGCTTGAGGATTACTGGAATGAGTCTCAAGGCAATCTGAGACCCGGTCCTCCAGCCGCAGATGGGTGGATTGCTGAATTTAGTCAACATAGGGGAAGATATGATAATCCTGATTCGTGGGCTAGCTCATTTGAGCAACAGTATGGTGCAAATGGTTGGGTGTCTGAATTTGAACACTCCCAATTGTCATCAGTAGATCAAATGCAAGGTATGAACATGTCGAACATTGCTGCAATGGAGCAAACTCGTATGCTTGCTAACACATTGGCCCAAAATGGTGACCCTAAATTTCAGAACTCAAAATTCCTTCAATTTGTATCAAAGATGAGCCGTGGTGAGTTGATTATTGATGACAATCAAAGAATCCATTACCTGCGTCTGGAGATTGGGCAACAGAATACGATCAACAATATCATGGCTTATCATGGACCTGATCAGTGGGCAAATGAATTTACAACTGAAAGACAGCAAAATGATGCAGTTGGTGATCAGTGGGTTAACGAATTCTCAAAGTTGAATGTTAATGACTGGGCAGATGAATTTGGTCAGCAGTTTGGTGAAGGAGCCTTAGGGGATAGCACTTCTGATAGTTGGGCGCAGGCATATGATGAGTTCCTAAATGAGCAAGTTGCTACCAAGCAGCAGTTAGACAGTTCGAGGGGTGTATATGTCTTTTCAGATTTGAATCCTTATGTTGGTCATCCAAATCCACTAAAAGAAGGCCAAGATCTATTCAGAAAAGGACTTTTAAGTGAGGCAGTTCTTGCATTGGAAGCTGAAGTCCTTAAAAACCCCGAGAATGCTGAAGGGTGGAGACTGCTTGGAATAGCACATGCAGAGAATGATGATGATCAACAGGCTATTGCAGCAATGATGCGTGCACAAGAGGCTGACCCAACAAACCTGGAAGTGCTTCTTGCTCTTGGTGTTAGTCATACAAATGAACTGGAGCAAACAGCTGCTCTGAAGTATCTATATGGATGGTTGCGCCATCACCCAAAATATGGAACACTTGCCCCACCTGAGATGCCTGATTCTTTGTACTATGCTGATGTTGCTAGGTTATTCAATGAAGCTGCTGAACTCTCACCTGATGATGCGGATGTCCACATAGTTCTAGGGGTCATGTACAACTTATCCAGAGAATATGACAAAGCCATTGCATCTTTTGAAAGAGCACTGAAACTTAAGCCACAGGATTACTCTCTATGGAACAAGCTGGGTGCAACACAAGCAAACAGTGTTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCACTGGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAACCAGGGTATGTATGACGAGTCCATTCGTTATTATGTTCGAGCACTTGCAATGAATCCAAAAGCAGAGAATGCATGGCAATATTTGAGAATTTCATTGAGCTGTGCCTCTAGGAATGACATGTTGGAAGCTTGTGATAGTCGTAATCTGGATCTTCTCCAGAAGGAGTTTCCACTACAGTAAGGGTGCGTTTGAGTAAACAACTTAATTAATCGTTTATTGAATAGTACTTGTCATATAAGCACTTCCAAGTTATTTTTACAATTGAAATGGAAATAAGGTTAACTTATTTTCATATAAACTATTAACTATTTTTATAAGTTTTCATAGAGAGCTTATTGAAATAAGTTGAAAACAGTTTATGGACACATACTAAAAGTGTGTCATAGCTTCAAATAAGCTGTTGATAAGCAGAGTTTCATACGCTTCCTAAGTTTTGACATTTTCTGAGTAGATGAATTAAAGGAGGGTCAGTTCCACAGTGGAGGTGGTTGCTTGAACATGAATTTTTACTTAAAACTTTTGAACGAGTAAATGGCACATTTTTTGTTTTTAAAGCTCGCAGTAGATGTCTGCTTCCGTAGAAATTTCTAGGAGAACTGAGGTCGATCAAGTTTCTAAGCCTGCTGGCGAATACGAGGCATTGTTCTATCATGAAAGTACATCATCCTACACTTGGTTTAGGCAGTTATATACTCAATTTCTTAATGTTACAAAAGCTATTTATCATAGAACAGCTGCAGTACTGAAGTTAAGGAATGTGGCTTTCCATATTATAAAGTTGGGTTTATCGTGAATGTACATATATACTACAATATCATGTATCTAATTTGTCATATTATTATTTGTATTAGCTTTCCACTTTCCAATAAAGCCTTCGTTCATTGTATCATA 2989 0.4189 MAMRDLVSGSAACGDSSSSSSANPLASLANALIGSSSKTQERLKEIPTSTLTDPGSQFYSTTLPANHLPGSELDKPLLDANSQASEFLHRFRGTTGLEETWDEIQREGTPQRVLSNFLHQFLDSSRGGVPFHPAPLPMLGLSEGDKQCIRDRSSIMARHLFADKSEEFIDAQVNALLCSLDIDSNVRGKGPMPERFRELEDYWNESQGNLRPGPPAADGWIAEFSQHRGRYDNPDSWASSFEQQYGANGWVSEFEHSQLSSVDQMQGMNMSNIAAMEQTRMLANTLAQNGDPKFQNSKFLQFVSKMSRGELIIDDNQRIHYLRLEIGQQNTINNIMAYHGPDQWANEFTTERQQNDAVGDQWVNEFSKLNVNDWADEFGQQFGEGALGDSTSDSWAQAYDEFLNEQVATKQQLDSSRGVYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPTNLEVLLALGVSHTNELEQTAALKYLYGWLRHHPKYGTLAPPEMPDSLYYADVARLFNEAAELSPDDADVHIVLGVMYNLSREYDKAIASFERALKLKPQDYSLWNKLGATQANSVQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKAENAWQYLRISLSCASRNDMLEACDSRNLDLLQKEFPLQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01230 703 ProSiteProfiles TPR repeat profile. 465 498 IPR019734 GO:0005515
Pste3g01230 703 Pfam Tetratricopeptide repeat 435 497 - -
Pste3g01230 703 PANTHER PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 1 700 IPR024111 -
Pste3g01230 703 MobiDBLite consensus disorder prediction 1 21 - -
Pste3g01230 703 ProSiteProfiles TPR repeat profile. 564 597 IPR019734 GO:0005515
Pste3g01230 703 Pfam Tetratricopeptide repeat 564 597 IPR001440 GO:0005515
Pste3g01230 703 Pfam Tetratricopeptide repeat 633 664 IPR001440 GO:0005515
Pste3g01230 703 Gene3D Tetratricopeptide repeat domain 412 703 IPR011990 GO:0005515
Pste3g01230 703 ProSiteProfiles TPR repeat profile. 632 665 IPR019734 GO:0005515
Pste3g01230 703 FunFam Peroxisome biogenesis protein 5 414 702 - -
Pste3g01230 703 ProSiteProfiles TPR repeat region circular profile. 632 664 - -
Pste3g01230 703 SMART tpr_5 598 631 IPR019734 GO:0005515
Pste3g01230 703 SMART tpr_5 632 665 IPR019734 GO:0005515
Pste3g01230 703 SMART tpr_5 465 498 IPR019734 GO:0005515
Pste3g01230 703 SMART tpr_5 564 597 IPR019734 GO:0005515
Pste3g01230 703 MobiDBLite consensus disorder prediction 37 57 - -
Pste3g01230 703 SUPERFAMILY TPR-like 416 702 IPR011990 GO:0005515
Pste3g01230 703 ProSiteProfiles TPR repeat region circular profile. 564 597 - -
Pste3g01230 703 ProSiteProfiles TPR repeat profile. 598 631 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01230 577 695 Glycosyltransferase AT3G04240 31.933 4.68e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01230 3 7812922 7829005 Pste3g01230 3 7812922 7829005 ECH