Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01229 ATGGCAGAGTCTAGAGTGCTTCCACTGCAAAGTGAGTCCATATTGATGATCACACTGTTGCTAATGCTTCTGTTTATCAAAAGTGTAAGCGACTGTGCAAAATCGTCTTGTGGGCCTAATCAACCACCTATTAGATTTCCCTTCCAACTTGTGAAGGGGATGAAAGATGAATGTGGTTATCCTGGGTTTTGTGTATACTGTACTGAAAAAAAAGAGACCATGCTTGCACTCTCCACAATAAAACTCCAAGTCAGTCAAATAGACTACCAATATCAGGTGATTTTATTGACCGACCCAGAAAATTGTCTTCCTAACAAGTTTCAAGAACTCAACAACTCTGTCATTCCTCATTACCAATATGAATCAGAAAAAACAAAGTTGAGTTTCTTCAACTGTTCTTTGGCTGGGAATCGACACGTGAGAAACATGGAGCAACTAGATCCTTATTCAGAAGATAAAATGTCCTGTCCGATTTATGTCTCTAATCCTTATGACAGTGTCCTTAAATTGGATTTAACATTGTGCACCAAGATGTTTGACATCGTTGCACCAGGAAGGAACTTCTACCTGCAGGAAAATTCGATGTCTTTGAGATGGTCCAAACCAAATTGTACCATCTGTGAAGCAAAAGGAGAGAGATGCAAATGGAAGAACAATAGCACAAAAGGAAACATCGAATGTTTTGACTGCAAAAGCAAACATAAAAAGTTTTCCACCCGATCGTTTATTTTCTCTTCTATAGGTATTGTAGGTTCGGTTCTTTTGGGGTTGGTGGTCATTGCATTGTTTAAGATAATCCGTTATTTCAGAAGGAAAGAAGAAGACCAAGCGAGAGTAGATAAGTTTTTAGAGGATTACAAAGCAGAAAAGCCTGCAAGATTTACCTATGCTGATGTTAAGAGAATCACAGGTGGTTTCAAAGAGAAGTTAGGGGAAGGAGCTCACGGAGCTGTATTTAGAGGAAAACTTTCAAATGAGATTCTAGTGGCTGTGAAGATCCTCAATAATACTGAGGGGGAAGGGAATGACTTCATCAATGAAGTGGGAATTATGGGCAAAATCCACCACATCAACGTGGTTCGTTTGCTTGGCTTCTGTGCTGAAGGACTCCATCGTGCTCTTGTGTACAATTTGTTTCCAAATGGTTCACTACAAAACTTCATATTTTCACCTAATGATAGGGAACATTTTCTTGGCTGGGAGAAGTTGCAACATATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTCCATCAAGGTTGTTGTGAACATCCCATTATTCACTTTGACATCAATCCTCACAATGTATTACTTGATGATAACTTTGGTCCAAAAATTTCTGATTTTGGCCAGGCCAAGTTGTGCTCCAAGAATCCTAGTTTGGTGTCAATGTCAGCTGCTAGGGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCTAGGAACTTTGGAAGTGTATCTTATAAGTCTGATATTTATAGCTACGGAATGTTGTTGCTAGAAATGGTTGGAGGAAAGAAAAATGTAGGCATGTCATCTGCACAAAATTGTCACGTTCTTTACCCGGATTGGATCCATGACTTAGTTGATGGAGATATACATATTCAGGTTGAGGATGAAGGTGATGTTAAAATTGCAAAGAAACTAGCAATTGTGGGACTTTGGTGTATTCGGTGGCAGCCAGGAAATCGTCCATCCATAAAATCTGTTATACAAATGCTGGAAACTAAAGAGGGAGACCAACTAATTGTGCCTCCTAATCCATTTCACTCAACAACTTCCAACACCAATGGATTCACTTCAACAAGACAACCTTTGGAAGTCATCGAAGAATGAGATATTTAATTACAACTTTTACACTCACAAAGAAGTGTTTTATATATTAACTAGTATGTATGTTGTGCATACGCACAAGTTAATAGATTGATGGTGTATATTACACGAAATAATATTTTATATTTAGCAACAAAAATTTAC 1977 0.3834 MAESRVLPLQSESILMITLLLMLLFIKSVSDCAKSSCGPNQPPIRFPFQLVKGMKDECGYPGFCVYCTEKKETMLALSTIKLQVSQIDYQYQVILLTDPENCLPNKFQELNNSVIPHYQYESEKTKLSFFNCSLAGNRHVRNMEQLDPYSEDKMSCPIYVSNPYDSVLKLDLTLCTKMFDIVAPGRNFYLQENSMSLRWSKPNCTICEAKGERCKWKNNSTKGNIECFDCKSKHKKFSTRSFIFSSIGIVGSVLLGLVVIALFKIIRYFRRKEEDQARVDKFLEDYKAEKPARFTYADVKRITGGFKEKLGEGAHGAVFRGKLSNEILVAVKILNNTEGEGNDFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNLFPNGSLQNFIFSPNDREHFLGWEKLQHIALGIAKGIEYLHQGCCEHPIIHFDINPHNVLLDDNFGPKISDFGQAKLCSKNPSLVSMSAARGTLGYIAPEVFSRNFGSVSYKSDIYSYGMLLLEMVGGKKNVGMSSAQNCHVLYPDWIHDLVDGDIHIQVEDEGDVKIAKKLAIVGLWCIRWQPGNRPSIKSVIQMLETKEGDQLIVPPNPFHSTTSNTNGFTSTRQPLEVIEE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01229 611 Gene3D Phosphorylase Kinase; domain 1 277 378 - -
Pste3g01229 611 FunFam S-receptor-like serine/threonine-protein kinase 271 378 - -
Pste3g01229 611 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 593 IPR045874 GO:0004672
Pste3g01229 611 Pfam Protein kinase domain 307 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01229 611 SUPERFAMILY Protein kinase-like (PK-like) 289 576 IPR011009 -
Pste3g01229 611 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Pste3g01229 611 ProSiteProfiles Protein kinase domain profile. 304 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01229 611 FunFam PR5-like receptor kinase 379 585 - -
Pste3g01229 611 Gene3D Transferase(Phosphotransferase) domain 1 379 583 - -
Pste3g01229 611 Pfam Wall-associated receptor kinase galacturonan-binding 32 98 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01229 Pste-Chr3 7809285 7811338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01229 32 588 Receptor kinase-like Gene Family AT1G66910 35.981 1.30e-100 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste3g01229 Pkinase 1.2e-41 CL0016