Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01227 AGTGAATCTGAACTCCTTAAGGACATTGTTGGAGATGTTTTAAGAAAACTGACTCCTAGCTACCCAAGCCAACTTAAAGGACTGGTTGGAATTGAGGACAATTATGAAAAGGTTCAACATTTACTAAAAATTGGATCAAGTGAAGTTGTAACTATTGGAATATGGGGCATGGGTGGCATGGGAAAGACTACCCTGGCTACTGCTTTCTATGCCAAACTGTCTCATGAGTTTGAGGCTAGTTGCTTCCTTATAAATGGAACTGATGTTGTTGAAGGCATAGCTTTAGATTTGGGTAAATTGACCGGGGATTTGAATTTAAGCTCTAATTCCTTCACAGAGATGACTAACTTGAGATTTCTTATCATCCATGATTCAAGCCTTACAAATGGATTTAGTGTATACTTTACAAATGGTCTTGACTCGTTGTCTTATAAATTGAGGTACCTCCGTTGGGATCGATTTTATCTAGAGTCTTTGCCATCTAACTTTTGTGCTGAACATCTTGTAGAGCTTCGTATGCCTCGTAGCAAGGTTAAAAAGCTTTGGGATGGGGTTCAGAACCTTGCAAATTTAAAGAAAATTAATCTTCTTGGCTCTCGTGATTTGATTGAGATCCCAGACTTATCTAAGGCTGAAAAACTTGAGAGTGTTTCTCTTCGTTATTGTACAAGCTTAGGTCATCTCCACCCATCTGTGTTATCTCTCCCCAAGCTTACATATTTGGATTTAAAAGTTTGTAGAAGGATAGAAAGCCTTAAAGTTAATTCAAAATCTCTCTGTAAACTGTATCTTGATGGTTGTTCATCTCTCAGGGAATTCTCAATAATATCAGAGGAAGGTTGTAACAATCTTGAGAGGTTATCACATGATCCAAGAATGAGATCCATTACAGCACTGCACCAGTCTGAATGCATGCAACACAATGAATCAAATTTATCATACTTGCAAGCACTCCTTCACAACATTGGCCACTTTTCCCTTTTACAAGTGTTAATCCTAAGTGGAACTAATGTTGAGAGCTTGCCTGCAAACATGAAAAACCTTTCTTTGTTGACAATGCTTTACTTAGATGGATGTAGAAAACTTGTGTCTTTGCCGGAGCTTCCACAATCCTTGAGAGAAGTTCACGTAGACAATTGCACAAAACTCATTTCTCTTCCCGAGCTTCCACCATTGGTGAGGGTGGTCTGGGGCATAAACTGCACTTCTCTAGAGACAAAATTCACTCAACAGATAGTGTTACAACACATATTACAAAGCCGCATACCTTACCTACACAAACATCCTAACTATTTTGACTTTGAGTATTTCATCTTCCCAGTAGAGCATATCACTGACCAGTGTGGGTTTTGTACAGCAGAGAGCTCAATAACTATTCCTTATCTGCCACTAACAGACTTGGTTGGTTTCATTTATTGCGTCATTCTTTCTAAGGGATCACACGAAGTAGATATTTTGTGTTCTATCTATCAAGAGGGCAAATTGGTCGGCATGGACAACAACTTTATAGTTTATGAAAATTCAATTTCAGATCATGTGTTATTTTCATTTGTTAAAATGCAGGATCATTTATTCAGCATACCATTTAAATTTCAATTTGATTATGATGATGACAACAAACGCCATCAAGAAAGAATAAAAGATTGTGGGGTCTTCCCAGTTTATTCCTCAGAATCAGGGTTCAAGCTCTTTGGTAATATTAGCATGGAAAATTTTGAATCTGAATCCATTAATCAAATGTCTGATAATGAGTCAGAGCCTAGAACAATTCGATTTGGGGTTGGAGGGTCTAATAATGAAAATGAACAAGACTCAGAACAACTTCTTCCAGAAGAGAAGAGGAGGAGG 1848 0.3782 SESELLKDIVGDVLRKLTPSYPSQLKGLVGIEDNYEKVQHLLKIGSSEVVTIGIWGMGGMGKTTLATAFYAKLSHEFEASCFLINGTDVVEGIALDLGKLTGDLNLSSNSFTEMTNLRFLIIHDSSLTNGFSVYFTNGLDSLSYKLRYLRWDRFYLESLPSNFCAEHLVELRMPRSKVKKLWDGVQNLANLKKINLLGSRDLIEIPDLSKAEKLESVSLRYCTSLGHLHPSVLSLPKLTYLDLKVCRRIESLKVNSKSLCKLYLDGCSSLREFSIISEEGCNNLERLSHDPRMRSITALHQSECMQHNESNLSYLQALLHNIGHFSLLQVLILSGTNVESLPANMKNLSLLTMLYLDGCRKLVSLPELPQSLREVHVDNCTKLISLPELPPLVRVVWGINCTSLETKFTQQIVLQHILQSRIPYLHKHPNYFDFEYFIFPVEHITDQCGFCTAESSITIPYLPLTDLVGFIYCVILSKGSHEVDILCSIYQEGKLVGMDNNFIVYENSISDHVLFSFVKMQDHLFSIPFKFQFDYDDDNKRHQERIKDCGVFPVYSSESGFKLFGNISMENFESESINQMSDNESEPRTIRFGVGGSNNENEQDSEQLLPEEKRRR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01227 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 120 IPR027417 -
Pste3g01227 616 MobiDBLite consensus disorder prediction 575 604 - -
Pste3g01227 616 Pfam NB-ARC domain 33 82 IPR002182 GO:0043531
Pste3g01227 616 Pfam Leucine Rich Repeat 167 186 IPR011713 -
Pste3g01227 616 PRINTS Disease resistance protein signature 346 362 - -
Pste3g01227 616 PRINTS Disease resistance protein signature 51 66 - -
Pste3g01227 616 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 85 IPR044974 GO:0006952
Pste3g01227 616 Gene3D Ribonuclease Inhibitor 129 254 IPR032675 -
Pste3g01227 616 Gene3D Ribonuclease Inhibitor 275 413 IPR032675 -
Pste3g01227 616 SUPERFAMILY L domain-like 105 404 - -
Pste3g01227 616 Gene3D - 13 124 IPR027417 -
Pste3g01227 616 MobiDBLite consensus disorder prediction 575 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01227 Pste-Chr3 7802922 7806557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01227 29 91 WRKY Transcription Factor Family AT5G45050 34.921 3.56e-08 55.1