Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01226 AGTCCAAGTTTGAAAAACAAATGGATAAGCTGAATTTTGTTAAAAATGGACTGGGCAAACTGCTTCCTGGTTTTCGTTTTCAGCCAATAGATGAAGAAATTGTTTTTCAATACTTGAAATGTATGGCAAATGTGATGGGCAAGAGAGGCACTTTTTCAGCCCGAAGGAAGGAAATGGTAATCGAAGAACAAAGTGAGGGTATTGGAAGGCAACAGGGTCAGACAAAAGAATATCATCTTCAACGAAAATCTCCAAAAGGGTCCAGAACCCAGTGGGTCTTGCACGAATATCGTCTCCTCGCTCTTCAACCTACTACTGCTGCTTGCAACTCATCT 335 0.4119 MDKLNFVKNGLGKLLPGFRFQPIDEEIVFQYLKCMANVMGKRGTFSARRKEMVIEEQSEGIGRQQGQTKEYHLQRKSPKGSRTQWVLHEYRLLALQPTTAACNSS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01226 105 Gene3D NAC domain 33 105 IPR036093 GO:0003677|GO:0006355
Pste3g01226 105 SUPERFAMILY NAC domain 12 94 IPR036093 GO:0003677|GO:0006355
Pste3g01226 105 MobiDBLite consensus disorder prediction 56 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01226 Pste-Chr3 7801613 7802505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01226 1 92 NAC Transcription Factor Family AT5G13180 32.609 1.94e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste3g01226 None None None