Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01217 TGAGTTTTAGCTTTCATTTTGTAATTTTGGAATATTGCCCTGTGAAGAGCTTGTGTATTAGTGCTTGAAATTTGAAATCTTGAACTGGGTTTGTTTTTTCCCTTCATTTTCAGTAACCCTTTTAGTTCAGAATAAAGTGGTCCCTTTCTGTTTCTTTCGTCCTTTTTTTAAGAGGATGAATGGACAAAAAATTAAGCGCCGCGTGGGAAAATATGATGTAGGGAGGACCATTGGTAAGGGAACATTTGCAAAGGTGAAGTTTGCAAGAAACTCTCAAACTGGGGAGGCTGTGGCTGTCAAGATTATTGAAAAAGAGAAGGTTTTCAAGTATATGATGGCTGATCAGGTCAGGAGAGAAATATCCACGATGAAGTTAATCAAGCATCCAAATGTTGTTCAAATATATGAGGTAAACAATGGAAGGATGAGTGAAAAGGAAGCGCGTAGGTATTTCCAGCAGCTTATAGATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTTAAACTAGAGAACTTGCTATTAGATGCTTCTGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAAGAAGTCAGGGACGATGGACTGCTCCATACAACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTGGATGACGGAGGCTATGATGGGGCAGCCACAGATTTGTGGTCATGTGGTTACTTGCCTTTTGATGACACTAGTCTTTTGAACCTGTATAGAAAAATTTCAGCTGCTGAATTTACTTTTCCCCCTTGGCTGTCTTTTAGTGCTAGGAAATTGATAACTAGAATCTTGGATCCCAACCCCTTCACTCGTATCACTGTACCTGAGATTTTGCATGATGAATGGTTTAAGAAAGACTATAAACCTCCGGTTTTCAAGGAGACAAAAGAGGCCAACGTTGATGACATAGATGCTGCCTTTAAAGATTACGAAGTGCACAATGTAAGAGAGAAGGAAGCCAAGCCAACACCAATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGTTGACATAGATCAGAGATTTAAACAGGAAGTAAGGTTCACATCAAAATGCCCTGCCAATGAGATAATCAAGAAGATTGAAGAAGCTGCAAAACCTCTTGGTTTTGATGTGCAGAAGAAAAATTTCAAGATGAAGCTTGAAAATGTGAAAGTTGGAAGGAAGGGAAATCTCAATGTTGCCACAGAGATATTTCAAGTGGCTCCTTCTCTTCATGTGGTTAAGTTCTACAACAAGCTTTCAACATGCTTGGAGGATGTTGTTTGGAAAACTGAAGATAACATGGAAGATAAAAAGTGAAATTGTTCTAACCACCAAATGGTATTTTTTGGTGTATAACAATGTCATAACATGTTTCAAATTCTTAATTTTTATTCTATATCATCTTTTGTAGATTTGGTTGGACATATACTAATGTTTTCCATGAATTATTGTTGGAAAGCATCCGGTTCATGTTGATAATCTTCAAATGTTGAACTGTGTTCATGAACAAGAAATATGAAAGGACTTGGACATTGT 1576 0.3801 MNGQKIKRRVGKYDVGRTIGKGTFAKVKFARNSQTGEAVAVKIIEKEKVFKYMMADQVRREISTMKLIKHPNVVQIYEVNNGRMSEKEARRYFQQLIDAVDYCHSRGVYHRDLKLENLLLDASGNLKISDFGLSALSQEVRDDGLLHTTCGTPNYVAPEVLDDGGYDGAATDLWSCGYLPFDDTSLLNLYRKISAAEFTFPPWLSFSARKLITRILDPNPFTRITVPEILHDEWFKKDYKPPVFKETKEANVDDIDAAFKDYEVHNVREKEAKPTPMNAFELISLSKGLNLENLFVDIDQRFKQEVRFTSKCPANEIIKKIEEAAKPLGFDVQKKNFKMKLENVKVGRKGNLNVATEIFQVAPSLHVVKFYNKLSTCLEDVVWKTEDNMEDKK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01217 393 SMART serkin_6 13 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01217 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
Pste3g01217 393 CDD CIPK_C 278 368 - -
Pste3g01217 393 Pfam Protein kinase domain 81 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01217 393 Pfam Protein kinase domain 13 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01217 393 ProSiteProfiles NAF domain profile. 272 296 IPR018451 GO:0007165
Pste3g01217 393 Gene3D Kinase associated domain 1, KA1 271 384 - -
Pste3g01217 393 Pfam NAF domain 274 334 IPR004041 GO:0007165
Pste3g01217 393 Gene3D Transferase(Phosphotransferase) domain 1 81 242 - -
Pste3g01217 393 Gene3D Phosphorylase Kinase; domain 1 4 80 - -
Pste3g01217 393 FunFam Maternal embryonic leucine zipper kinase 78 287 - -
Pste3g01217 393 FunFam Non-specific serine/threonine protein kinase 272 383 - -
Pste3g01217 393 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 373 - -
Pste3g01217 393 ProSiteProfiles Protein kinase domain profile. 13 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01217 393 FunFam Aurora kinase A 5 84 - -
Pste3g01217 393 SUPERFAMILY Protein kinase-like (PK-like) 9 251 IPR011009 -
Pste3g01217 393 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01217 Pste-Chr3 7752633 7760171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01217 4 358 CBL-interacting serine-threonine protein kinases AT2G26980 69.923 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste3g01217 Pkinase 4.5e-35 CL0016