Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01206 TATTTTTAATTAATTTTTGGTTGAACCTGAAATTGACGACTCAGCCTCTTTAGCTAAGTATAGCATTGCCGTGAACATTTTCTTCATGATTAAATCAGATAAAACCTTCCAATTTTGAGACTTTTCCTTCACACCTTTTGCATTTACTTCATGAATTTTGTTGGTTTGGTCTGATTACATACTTTTAATCATGGGAAACGCTTGTGCTAAAGGAAAACCAGTTGTTCATGTATCTTCATCCAATTTTTCTGGAAGTAAGAAGGCTGCTAGTAAGCCAAAGCAGTTTTCAAATTCTTCTGAACAAAGACCTGCTCCAAAACCTTCAGAATCAAATGTTGCCCAATCCATCTCTAGTAGCCTTAAGTCCTTCAGCTTGAATGATCTAAAAGAGGCCACTAAGAACTTCCGGCGAGAAAATTTAATTGGAGAGGGAGGATTTGGGCGTGTCTTCAAAGGATGGATTGATGAGAACACATATGCTCCCACAAAACCAGGCAGTGGAATTGTGGTGGCCATTAAAAATCTTAAGCCAGAAAGCTTCCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTTGGGCAGCTTCAGCATGAAAATTTGGTGAAACTAATTGGCTATTGCCTGGAAGGTAAAAACAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGTTTGGAGAATCATTTATTCAGAAAAGGCGTTCAACCTATGGCATGGGTTATAAGGGTCAATATTGCAATTGGTGTTGCAAGAGGACTAACATTCTTACATTCCCTGGATCAAAATGTTATCTTTCGTGATTTAAAGGCTTCCAATATCCTACTTGATTCAGACTTCAATGCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGTCATTTGACCCCAAGGAGTGATGTATACAGCTTTGGTGTAGTCTTGTTAGAGTTACTAACCGGAAGGCGTGCCGTTGAAGATGACAGACCTGGATTTTCAGAGGAAACCCTGGTTGATTGGGCAAAGCCATTCCTTAGTGACAACAGAAGAGTTTTGAGAATTATGGATACAAGGTTGGGGGGTCAATACTCCAAGAAAGGAGCACAAGCTGCAGCTGCACTTGCATTGCAGTGCCTTAACACTGACCCCAAATTTAGACCACCTATGGTGGAAGTTCTTGCAGCATTGGAAGGACTTAATTGCTCAAACTCATACAAGAGCACCAAAATCTGAGAGTCATAAACTCAAACATTCTGGTGCTCATTCAGAGGTAAAATGGAAATGCAAATATGAGCTACTTGTCTTGTTCTGTTTCACTTATGGGATGAATACCTCTAAATCCTTCCATAAAGAAAAGAACAAAAGAGTAATATGTTATACCAACTAATGGTTTGTTCTTTCATTTCTTTGCCTAAGCGAAGAATTGCCATCTTTGCGGGTTAGAGTGTAGATTAATATATTGTGGTAATAGCTAGATTCATATTACATTGTATGAGTTTGTTGAGCTTTTAGGATGGGTATAGGTACATATAGAAAATTGGAAAATTAAAATTTAATGGAAATGTTTAAGGGGGTATTCTTTTCTTCATAAGATATCTGTTTTAGCTAGCTATACGCTTCAAGCTTCAAAGTTTGGACTAATTGTATATCAATCTTTAACAACAGTAATTTCTTTTTATATAAAGTTTTTCTTCCCAAGATATAACAAAATGGTCCG 1697 0.3765 MGNACAKGKPVVHVSSSNFSGSKKAASKPKQFSNSSEQRPAPKPSESNVAQSISSSLKSFSLNDLKEATKNFRRENLIGEGGFGRVFKGWIDENTYAPTKPGSGIVVAIKNLKPESFQGHKEWLAEVNYLGQLQHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPMAWVIRVNIAIGVARGLTFLHSLDQNVIFRDLKASNILLDSDFNAKLSDFGLARDGHLTPRSDVYSFGVVLLELLTGRRAVEDDRPGFSEETLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKFRPPMVEVLAALEGLNCSNSYKSTKI 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01206 340 ProSiteProfiles Protein kinase domain profile. 72 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01206 340 SUPERFAMILY Protein kinase-like (PK-like) 46 330 IPR011009 -
Pste3g01206 340 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Pste3g01206 340 SMART serkin_6 72 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01206 340 FunFam Serine/threonine-protein kinase BIK1 40 157 - -
Pste3g01206 340 Gene3D Transferase(Phosphotransferase) domain 1 158 230 - -
Pste3g01206 340 Gene3D Transferase(Phosphotransferase) domain 1 231 339 - -
Pste3g01206 340 Pfam Protein tyrosine and serine/threonine kinase 75 229 IPR001245 GO:0004672|GO:0006468
Pste3g01206 340 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Pste3g01206 340 MobiDBLite consensus disorder prediction 13 50 - -
Pste3g01206 340 PANTHER OS01G0588500 PROTEIN-RELATED 36 230 - -
Pste3g01206 340 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01206 Pste-Chr3 7706188 7710917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01206 22 326 Glycoside Hydrolase AT3G07070 42.388 6.66e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste3g01206 PK_Tyr_Ser-Thr 1.3e-33 CL0016