Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01204 ATGGAAACCCTTGGAAAAACATTCCTCACACTCCTGTTTTTATCTTCAATTTTCTCAATAGCCTCATCAAGAAGAGGATCGGTTTCATCCAGCAACATAGATTGGTGGTGCAACCTAACCCCACACCCTATGCCATGCAGATACTACATGACTACTGAAATGAAGAACCATGGTTTCACAATGAAACACAAAACTATCTTCCGGGGAATGCTTGTTCAACATGCCTTAAACCAAGCGCTCATCATGCAAAAAGAAGCACATGAATCTGACCAAAAAAGCATCACAACAAAGAGTCATAGAAGTGTTCATGGTGACTGTTTGAAGCTCTATGAGAAAACCATCTTCCACCTGGCCCGCACCCTTGAATGCTTCGATGGGAAGCAAAACTGTTCTTCGGTTGATGCACAAACGTGGCTCAGCACTGCTCTCACAAACATTCAAACGTGTGAAACAGGCGCAGTTGAAGTTGGGGTTGAAGATTTCAAGGCTCCCAAGAATGTTTCTGAGATGATAAGAAACAGCTTGGCAATGAACATGGAGTTGATGAAACATGATGAGCAGAAAGCAGAAGGTGCGTTTCCAAGTTGGTTTTCAACGCATGAGAGGAAGCTGTTGCAGTCTTCAAGAATAAAAGCACATGTTGTGGTGGCAAAAGATGGTTCGGGGAATTTCAAGAGTGTGCAAGAAGCTCTGGATGCTGCTGCAAAGAGGAGAGTGAAGACAAGGTTTGTGATACATGTGAAGAAAGGAGTCTATAGAGAGAATATTGAGGTTGCTGTGCACAATGATAACATAATGCTTGTTGGTGATGGATCGAGAAATACCATAATCACAAGTGGAAGAAGTGTTCAAGATGGGTACACCACTTACAGCTCTGCAACTGCTGGTAAGTTAAATATATTAATTCATATACAGGCCTCACAAGGCCAAGCGGTGGCGCTGAGGTCGGCGTCGGATCTGTCGGTGTTCTACCGTTGCAGCATAATGGGCTACCAAGACACCCTGATGGCTCATGCACAACGCCAATTTTACAGGCAATGCTTCATCTATGGCACCGTTGACTTCATCTTTGGCAATGCTGCAGTTGTCTTCCAAAATTGTTACATTTTCGCAAGAAAACCCTTAGAGGGCCAAGCTAACATGATCACGGCCCAAGGTCGCGGTGACCCATTTCAAAACACTGGAATTTCTATCCATAACTCTCAAATCCAGGCCGCGCCTGACCTCAGGCCCGTTGTTGACAAATACAACACTTTCTTGGGTAGGCCTTGGCAGCAATACTCTAGAGTTGTCGTCATGAAAACTTTCATTGACTCCTTCGTTAGCCCATTGGGTTGGTCTCCATGGGGTGATTCTGATTTTGCTCAAGACACACTTTACTATGGAGAGTACCAAAATCACGGGCCTGGGGCTTCTACCACTAATAGAGTCAAATGGCCCGGTTTTCATGTCATTAAAAGCCCAACAGAAGCCTCACAGTTTACGGTTACTCGTCTCCTTGCTGGCCCAACATGGTTGGGTTCTACAACTGTGCCATTTACCTCTGGTCTTTGA 1554 0.4485 METLGKTFLTLLFLSSIFSIASSRRGSVSSSNIDWWCNLTPHPMPCRYYMTTEMKNHGFTMKHKTIFRGMLVQHALNQALIMQKEAHESDQKSITTKSHRSVHGDCLKLYEKTIFHLARTLECFDGKQNCSSVDAQTWLSTALTNIQTCETGAVEVGVEDFKAPKNVSEMIRNSLAMNMELMKHDEQKAEGAFPSWFSTHERKLLQSSRIKAHVVVAKDGSGNFKSVQEALDAAAKRRVKTRFVIHVKKGVYRENIEVAVHNDNIMLVGDGSRNTIITSGRSVQDGYTTYSSATAGKLNILIHIQASQGQAVALRSASDLSVFYRCSIMGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCYIFARKPLEGQANMITAQGRGDPFQNTGISIHNSQIQAAPDLRPVVDKYNTFLGRPWQQYSRVVVMKTFIDSFVSPLGWSPWGDSDFAQDTLYYGEYQNHGPGASTTNRVKWPGFHVIKSPTEASQFTVTRLLAGPTWLGSTTVPFTSGL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01204 517 SUPERFAMILY Pectin lyase-like 209 516 IPR011050 -
Pste3g01204 517 Gene3D - 207 517 IPR012334 -
Pste3g01204 517 SMART PMEI_2 28 177 IPR006501 GO:0004857
Pste3g01204 517 PANTHER PECTINESTERASE 19 507 - -
Pste3g01204 517 Pfam Plant invertase/pectin methylesterase inhibitor 32 177 IPR006501 GO:0004857
Pste3g01204 517 NCBIfam pectinesterase inhibitor domain 7 178 IPR006501 GO:0004857
Pste3g01204 517 Pfam Pectinesterase 213 502 IPR000070 GO:0030599|GO:0042545
Pste3g01204 517 CDD PMEI-like_3 35 183 - -
Pste3g01204 517 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Pste3g01204 517 FunFam Pectinesterase 207 517 - -
Pste3g01204 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 182 IPR035513 -
Pste3g01204 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 178 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01204 Pste-Chr3 7670854 7672757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01204 29 517 Carbohydrate Esterase AT5G51500 54.012 0.0 541