Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01190 AATGGAAACCCTTGGAAAACATTCCTCACACTCCTGTTTTTATCTTCAATTTTCTCAATAGCCTCATCAAGAAGAGGATCGGTTTCATCCAGCAACATAGATTGGTGGTGCAACCTAACCCCACACCCTATGCCATGCAGATACTACATGACTACTGAAATGAAGAACCATGGTTTCACAATGAAACACAAAACTATCTTCCGGGGAATGCTTGTTCAACATGCCTTAAACCAAGCGCTCATCATGCAAAAAGAAGCACATGAATCTGACCAAAAAAGCATCACAACAAAGAGTCATAGAAGTGTTCATGGTGACTGTTTGAAGCTCTATGAGAAAACCATCTTCCACCTGGCCTGCACCCTTGAATGCTTCGATGGGAAGCAAACTGTTCTTCGGTTGATGCACAAACGTGGCTCAGCACTGCTCTCACAAACATTCAAACGCGCAGTTGAAGTTGGGGTTGAAGATTTCAAGGCTCCCAAGAATGTTTCTGAGATGATAAGAAACAGCTTGGCAATGAACATGGAGTTGATGAAACATGATGAGCAGAAAGCAGAAGGTGCGTTTCAAAGGAAGCTGTTGCAGTCTTCAAGAATAAAAGCACATGTTGTGGTGGCAAAAGATGGTTCGGGGAATTTCAAGAGTGTGCAAGAAGCTCTGGATGCTGCTGCAAAGAGGAGAGTGAAGACAAGGTTTGTGATACATGTGAAGAAAGGAGTCTATAGAGAGAATATTGAGGTTGCTGTGCACAATGATAACATAATGCTTGTTGGTGATGGATCGAGAAATACCATAATCACAAGTGGAAGAAGTGTTCAAGATGGTTACACCACTTACAGCTCTGCAACTGCTGCCGGGCCTCACAAGGGCCAAGCGGTGGCGCTGAGGTCGGCGTCGGATCTGTCGGTGTTCTACCGTTGCAGCATAATGGGCTACCAAGACACCCTGATGGCTCATGCACAACGCCAATTTTACAGGCAATGCTTCATCTATGGCACCGTTGACTTCATCTTTGGCAATGCTGCAGTTGTCTTCCAAAATTGTTACATTTTCGCAAGAAAACCCTTAGAGGGCCAAGCTAACATGATCACGGCCCAAGGTCGCGGTGACCCATTTCAAAACACTGGAATTTCTATCCATAACTCTCAAATCCGGGCCGCGCCTGACCTCAGGCCCGTTGTTGACAAATACAACACTTTCTTGGGTAGGCCTTGGCAGCAATACTCTAGAGTTGTCGTCATGAAAACTTTCATTGACTCCTTCGTTAGCCCATTGGGTTGGTCTCCATGGGGTGATTCTGATTTTGCTCAAGACACACTTTACTATGGAGAGTACCAAAATCACGGGCCTGGGGCTTCTACCACTAATAGAGTCAAATGGCCTGGTTTTCATGTCATTAAAAGCCCAACAGAAGCCTCACAGTTTACGGTTACTCGTCTCTCTTGCTGGCCCAACATGGTTGGGTTCTACAACTGTGCCATTTACCTCTGGTCTTTGAGCTTA 1503 0.4538 NGNPWKTFLTLLFLSSIFSIASSRRGSVSSSNIDWWCNLTPHPMPCRYYMTTEMKNHGFTMKHKTIFRGMLVQHALNQALIMQKEAHESDQKSITTKSHRSVHGDCLKLYEKTIFHLACTLECFDGKQTVLRLMHKRGSALLSQTFKRAVEVGVEDFKAPKNVSEMIRNSLAMNMELMKHDEQKAEGAFQRKLLQSSRIKAHVVVAKDGSGNFKSVQEALDAAAKRRVKTRFVIHVKKGVYRENIEVAVHNDNIMLVGDGSRNTIITSGRSVQDGYTTYSSATAAGPHKGQAVALRSASDLSVFYRCSIMGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCYIFARKPLEGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLRPVVDKYNTFLGRPWQQYSRVVVMKTFIDSFVSPLGWSPWGDSDFAQDTLYYGEYQNHGPGASTTNRVKWPGFHVIKSPTEASQFTVTRLSCWPNMVGFYNCAIYLWSLSL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01190 501 ProSitePatterns Pectinesterase signature 2. 330 339 IPR033131 -
Pste3g01190 501 SUPERFAMILY Pectin lyase-like 198 479 IPR011050 -
Pste3g01190 501 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 179 IPR035513 -
Pste3g01190 501 PANTHER PECTINESTERASE 20 481 - -
Pste3g01190 501 Gene3D - 196 490 IPR012334 -
Pste3g01190 501 Pfam Pectinesterase 202 479 IPR000070 GO:0030599|GO:0042545
Pste3g01190 501 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 130 IPR035513 -
Pste3g01190 501 FunFam Pectinesterase 4 199 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01190 Pste-Chr3 7603349 7605257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01190 29 480 Carbohydrate Esterase AT5G51500 50.810 6.69e-161 466