Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01189 AGAAAACTCAGCAAAAATGACCAAAAGTCTTGGCCTAACCATTGTGTTCATATCCTTATTTTCTCTGTCTTCCCCAGCTTTTTCAAGTCTTTTCTCCAATGTCATTGATTTTTGGTGCAATAAAACCCCACATCCTCGAACATGCAAGCACTTTGCCACAATAAATCATCATCACATTCATGATGTTATCCCAAAAAGTGCATTTCAATTCAAGAACCTCATCCTTAAAATTGCAATGGACCAATCAGTGAAAGCCCAACTTCACATCACGTGGTTGGGCTCAAAATGTGAAAGCAAGGAAGAAAAAGCAGCATTGTCAGATTGCATAACCCTCTACCAAGACACCATCAACATTCTCAGCCAAGCACTTAATCCCACCAAACAAAGCACAATCCATGATCTCCAAACATGGCTTAGCACAGCCCTAACCAACATTGACACATGCCAAACCGGGTTCCATGATCTTGGGGTTGCTGGCAACAATGTTCTACCCCTCATTCCCAACAAGAACATCTCAGAGGTCATTAGCGACTTTTTATCTCTTAACAATGCTTCCTTATTTATTCCTCCAAAGGCTAAACAAAATGGCTTTCCAATATGGTTATCACGCAATGATAGAAAGCTTCTAGAGTCACCAACGTTATCACCAGATGTTGTGGTCGCTAAAGATGGCTCAGGGAACTTTAAGACCATCAAAGAAGCTTTGAAATCAGTCCCCAAGATGAGTAGAAAGAGGTTTGTGATATATGTTAAGCGTGGAGTTTACAATGAAAACATTGAGATTGGGAATTCTATGAAGAATATTATATTTGTATGGCTCACCATCATTTCTGGTAGCCGAAGTGTTGGAGGAGGTTCTACCACTTTTAATTCAGCAACTGTTGCTGTGACAGGAGATGGGTTCATTGGTCGTGGCATCACATTCCGCAACAGTGCAGGCCCAGAAAAGCATCAAGCAGTGGCATTGCGTTGTGGTGCTGATCTTTCTGTCTTCTATCACTGTGCATTTGAAGGGTATCAAGACACTCTCTATGTTCACTCTCAAAGACAGTTCTACAAGGAATGTCACATTTTTGGCACTGTGGACTTCATCTTTGGCAATGCCGCTGTGGTCTTCCAATCCTGTAATATATATGCAAGAAGGCCTATGCCAAAGCAGAAAAATGTCATCACAGCACAAGGTAGAACAGATCCAAATCAAAACACAGGGATTTGCATTCAAAACTCACGTGTTATGGCTGCTGAAGACCTAGTTCTTGTGCTGAGTTCCTTCAAAACCTTCCTGGGTAGGCCATGGAGGGAGTATTCAAGGACAGTGTTCATGCATACTTACCTTGATGCATTGGTAGACCCTGCAGGGTGGTTGGAGTGGAAAGACGATTTTGCCCTTGACACTTTATATTATGGAGAGTACGAGAATCTTGGTCCTGGGGTTCCACAAGAGGTAGAGTTAAATGGC 1459 0.4222 MTKSLGLTIVFISLFSLSSPAFSSLFSNVIDFWCNKTPHPRTCKHFATINHHHIHDVIPKSAFQFKNLILKIAMDQSVKAQLHITWLGSKCESKEEKAALSDCITLYQDTINILSQALNPTKQSTIHDLQTWLSTALTNIDTCQTGFHDLGVAGNNVLPLIPNKNISEVISDFLSLNNASLFIPPKAKQNGFPIWLSRNDRKLLESPTLSPDVVVAKDGSGNFKTIKEALKSVPKMSRKRFVIYVKRGVYNENIEIGNSMKNIIFVWLTIISGSRSVGGGSTTFNSATVAVTGDGFIGRGITFRNSAGPEKHQAVALRCGADLSVFYHCAFEGYQDTLYVHSQRQFYKECHIFGTVDFIFGNAAVVFQSCNIYARRPMPKQKNVITAQGRTDPNQNTGICIQNSRVMAAEDLVLVLSSFKTFLGRPWREYSRTVFMHTYLDALVDPAGWLEWKDDFALDTLYYGEYENLGPGVPQEVELNG 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01189 481 Pfam Plant invertase/pectin methylesterase inhibitor 29 155 IPR006501 GO:0004857
Pste3g01189 481 ProSitePatterns Pectinesterase signature 1. 237 256 IPR018040 -
Pste3g01189 481 CDD PMEI-like_3 33 179 - -
Pste3g01189 481 Gene3D - 206 480 IPR012334 -
Pste3g01189 481 NCBIfam pectinesterase inhibitor domain 2 155 IPR006501 GO:0004857
Pste3g01189 481 SMART PMEI_2 25 176 IPR006501 GO:0004857
Pste3g01189 481 PANTHER PECTINESTERASE 19 473 - -
Pste3g01189 481 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Pste3g01189 481 Pfam Pectinesterase 212 474 IPR000070 GO:0030599|GO:0042545
Pste3g01189 481 SUPERFAMILY Pectin lyase-like 208 473 IPR011050 -
Pste3g01189 481 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 178 IPR035513 -
Pste3g01189 481 FunFam Pectinesterase 206 479 - -
Pste3g01189 481 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 179 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01189 Pste-Chr3 7589033 7594286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01189 9 473 Carbohydrate Esterase AT2G45220 54.681 1.39e-178 509