Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01184 ATGATTAGTGCTTTTGCTTCTTCCTCTGACTCTTCTTCTTTGGTGTCTTCTAAAACATATGATGTTTTCATAAGTTTTCATGGTGAGGACACTCGCACAAATTTCACAAGTCATCTCTATGAAGCTTTGAAGCAGAAGGGTGCTGAAACCTATATAGACTACCGGCTTGAAAAGGGAGAACAAATCTCACTAGCACTCATCAAAGCCATAAAAGATTCTCATATATCTATCATCCTGCTCTCAGATAATTATGCGTCATCAAAGTGGTGTTTGGAAGAACTAAATGAGATTCTAGATAGAAAGAAAAAACAAGGACAAATAGTGATACCGGTATTCTACAATGTAGATCCATCCCATGTGAGAAATCAAAGTGGAAGTTTTGGTCATGCCTTTTCAAAACACGGCGGAGAAGTCAGGATTGAATCTAATCTCCTTAAGGATATTGTTGGAGATGTTTTGCAAAAGTTGACTCTTAGGCTTGGATGTAAAAAGTTTTTAATTGTATTGGATGATGTGGATACTCCAGAGCTATTAGAATACTTGACTGAAGGTTTTGATTTCTTAGGAGAAGGAAGTAAAGTCATCATTACAACTAGATATAAGCAAATATTTAATCAAGTTAATGAAGTATATAATGTTAAGGAATTAAGTTGGCATCACTCTCTTCAGCTTTTTTGTTTGAATGCTTTTGGTGAAGAACATCCTAAATTTGGATATGAAGATCTATCTAGAAGTGTAATTTCCTACTGCAAAGGCAACCCTTTGGCTTTAAAAGTTTTGGGTGCTATTCTTCGTCGAAAAAGTATAGAGGCATGGGAAAGTGAAGTGAGAAAACTCCAACAGGCTGCAAATATGAAAATTTATGATGTATTGAAATTAAGTTACGATGACTTAGATCTTTCTCAAAAAGAAATCTTCTTAGACATTGCATGCTTCTTTAAAGGAAAAGATAGAGATTCAGTCAAAAATGGAACTGATGATGTGGAAGGTATAATTTTAAATTTGGATAGATTACCTCAGGATCTACATTTGAGCTCAAATGCTCTTGCAAAAATGACTAATGTGAGATTTCTTAAACTCTACAGAGGACACCACTATAGAAGGAGTAAAGAACAGTTTAATGTGTACTTTGACAATGGTCTAGAGTCATTATCACATAAATTGACATACCTATATTGGGAAGGGTTTTGTCTTGAATCTTTGCCATCTAACTTTTATGCTGAGCAACTTGTAGAACTTTCCATGGGTAATAGCAAAGTTAAAAAGCTATGGGATGGAGTTCAGCCAGAGGAATTGGAGGCACCATTGATGAGAAAGAATATTGTGAAGAACTCCTTCATGTATGGAAGAGGAATTGAATCTGATCTCCTTAAGAAGATTGATAAAGGTGTTTTGCAAAAATTGACTCTTGAGTATTCAAACCAACCTAAAAACCTCGTTGGGATTGAGTACAGTTATAAAGTGATTGAAGTACTAAAAATTGGGTCAAGTGAAGTTATAACCCTTGGAATATGGGGCATGAGAGACATAGGCAAAATGACCGTTGCTAGTGCTTTATATGCTAAATTGTCTCATGAGTTTGAAGGTTGTTGCTTCCAAGGAAGAATCAAACAGGCATAG 1620 0.3537 MISAFASSSDSSSLVSSKTYDVFISFHGEDTRTNFTSHLYEALKQKGAETYIDYRLEKGEQISLALIKAIKDSHISIILLSDNYASSKWCLEELNEILDRKKKQGQIVIPVFYNVDPSHVRNQSGSFGHAFSKHGGEVRIESNLLKDIVGDVLQKLTLRLGCKKFLIVLDDVDTPELLEYLTEGFDFLGEGSKVIITTRYKQIFNQVNEVYNVKELSWHHSLQLFCLNAFGEEHPKFGYEDLSRSVISYCKGNPLALKVLGAILRRKSIEAWESEVRKLQQAANMKIYDVLKLSYDDLDLSQKEIFLDIACFFKGKDRDSVKNGTDDVEGIILNLDRLPQDLHLSSNALAKMTNVRFLKLYRGHHYRRSKEQFNVYFDNGLESLSHKLTYLYWEGFCLESLPSNFYAEQLVELSMGNSKVKKLWDGVQPEELEAPLMRKNIVKNSFMYGRGIESDLLKKIDKGVLQKLTLEYSNQPKNLVGIEYSYKVIEVLKIGSSEVITLGIWGMRDIGKMTVASALYAKLSHEFEGCCFQGRIKQA 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01184 539 Gene3D - 14 160 IPR035897 -
Pste3g01184 539 ProSiteProfiles TIR domain profile. 18 156 IPR000157 GO:0007165
Pste3g01184 539 FunFam Disease resistance protein (TIR-NBS-LRR class) 217 299 - -
Pste3g01184 539 Pfam NB-ARC domain 153 295 IPR002182 GO:0043531
Pste3g01184 539 SMART till_3 19 155 IPR000157 GO:0007165
Pste3g01184 539 PRINTS Disease resistance protein signature 159 173 - -
Pste3g01184 539 PRINTS Disease resistance protein signature 250 264 - -
Pste3g01184 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 309 IPR027417 -
Pste3g01184 539 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 455 537 IPR044974 GO:0006952
Pste3g01184 539 Gene3D - 215 299 IPR042197 -
Pste3g01184 539 Gene3D Ribonuclease Inhibitor 325 491 IPR032675 -
Pste3g01184 539 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 134 IPR035897 -
Pste3g01184 539 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 157 - -
Pste3g01184 539 Pfam TIR domain 20 137 IPR000157 GO:0007165
Pste3g01184 539 Pfam Leucine Rich Repeat 409 428 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01184 Pste-Chr3 7550112 7559627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01184 326 432 WRKY Transcription Factor Family AT5G45050 33.929 1.42e-09 59.3