Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01182 AGATATTTGAGCATACATCGTCAAAGAAACAACATTCGCAGCCTTTGCCGGCACACTTTGATTTTCCACTCCAATTCCGATTTTCCGACCACCGTTTTTCGGACATTTTCCGGGAAAATTCGATCCCTATCACCGAAAACTCGAGCGACCATAAGACCCTCTTTCGATTCTCTTCATCTTCGGTGTTTTTTTGGCGCAGAAGAAGAAGACCCATTAGGGTTTTCGAGAAGTAATGGCTATGGCAGCCCCGGGGCAACTCAGCGTGAACGAGTCACCTTCGTGGGGATCCAGAAGCATCGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACTTATGGGTTTACATGGCTAGAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTGCACCATGAAAATGTAATCAAGTTAAAGGAAATTGTGACTTCTCCAGATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACTGGTCTTGCTGACCGACCTGGGATGAGATTCACAGTTCCCCAAATTAAGTGTTACATGAGACAGCTTCTGACTGGGCTGCATTACTGTCACGTAAATCAAGTACTTCACCGTGATATCAAAGGGTCCAATCTTCTCATAGATAATGAAGGCAATTTGAAACTTGCAGATTTTGGACTGGCACGATCATTTTCTAATGAGCATAATGCAAATCTTACAAATCGTGTCATCACATTATGGTACAGACCACCTGAGCTGCTGCTTGGGACAACAAGATATGGGCCAGCTGTAGACATGTGGTCTGTAGGGTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAATAAGATTTTTGAGCTATGTGGAGCACCAGATGAGGTGAACTGGCCTGGTGTTTCTAAGACTCCTTGGTATAATCAATTTAAGCCAACAAGACCAATGAAAAGACGTCTGCGGGAAGTTTTCAGACATTTTGAACGTCATGCTCTGGAATTGTTAGAGAAGATGCTGACGCTTGATCCAGCTCAGACGAAGAAAAAGCGGCAGCAGCAACGACAAAATGAAGAAAATGCTAAGCGCCTTAAAATGCAGCATCCGCAGCAGCATTCACGTCTGCCCCCGATTCAGCAGGCTGGGCAACAGCACCCCCAAATGCGGCAAGGTCCTAACCACCCTATTCATGGCTCTCAACCTGCAGTTGCTTCCGGACCTAGCCATCACTATGGTAAGCCTCGAGGTCCCTCTGGTGGGCCAGGAAGATATCCCCCAGGTGGAAACCCCAGCAGTGGATACAGTCATCCAAATCGGGGAGGTCAAGGGGGAGGAGGTGGTGGGTATGGCAGTGGGCCATACCCTCCACAAGGGCGAGCTGCACCTTATGGGTCAAGTGGTATGCCTGGTGGACCCAGTGGCGGTCCTCGCAGTGGTGGTGGTGGTGGTAGTACTGCCTATGGAGTTGGAGCTCCAAATTATCCTCAGGGTGCTCCTTACAGTGGATCCACAGCTGGGCGTGGCTCAAACATGATGGGTGGTAACCGCAACCAACAGTATGGTTGGCAGCAAAACCAGGAAAAGGGAAGAGAATCTCTTAATGCTTTTGTTACTGTTCTTGTTGATTTTTTTTTCTTTTTTTTGAATCTTGTACCCATTTCTGTTTTCTTTATTTTCAAACTAGTTTCATGGTTTTTTGTAACTTACTGGTTCTATTGTAATGTGAGGCAGAAAATATTAACTTTTGCCTCTCTTCTACTTAAAAGAGGATTTTTGTGGAGAAAAATTATATTTCATAGACTAGACCTATACACAGAGAGA 1914 0.4488 RYLSIHRQRNNIRSLCRHTLIFHSNSDFPTTVFRTFSGKIRSLSPKTRATIRPSFDSLHLRCFFGAEEEDPLGFSRSNGYGSPGATQRERVTFVGIQKHRLLREVGANWRGHLWVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFERHALELLEKMLTLDPAQTKKKRQQQRQNEENAKRLKMQHPQQHSRLPPIQQAGQQHPQMRQGPNHPIHGSQPAVASGPSHHYGKPRGPSGGPGRYPPGGNPSSGYSHPNRGGQGGGGGGYGSGPYPPQGRAAPYGSSGMPGGPSGGPRSGGGGGSTAYGVGAPNYPQGAPYSGSTAGRGSNMMGGNRNQQYGWQQNQEKGRESLNAFVTVLVDFFFFFLNLVPISVFFIFKLVSWFFVTYWFYCNVRQKILTFASLLLKRGFLWRKIIFHRLDLYTER 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01182 638 FunFam Cyclin-dependent kinase C-2 188 378 - -
Pste3g01182 638 MobiDBLite consensus disorder prediction 374 397 - -
Pste3g01182 638 PANTHER CELL DIVISION PROTEIN KINASE 115 382 - -
Pste3g01182 638 SUPERFAMILY Protein kinase-like (PK-like) 114 377 IPR011009 -
Pste3g01182 638 Gene3D Transferase(Phosphotransferase) domain 1 188 416 - -
Pste3g01182 638 ProSiteProfiles Protein kinase domain profile. 99 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01182 638 SMART serkin_6 115 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01182 638 MobiDBLite consensus disorder prediction 528 549 - -
Pste3g01182 638 Pfam Protein kinase domain 115 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01182 638 CDD STKc_CDK9_like 115 377 - -
Pste3g01182 638 Gene3D Phosphorylase Kinase; domain 1 89 187 - -
Pste3g01182 638 MobiDBLite consensus disorder prediction 374 549 - -
Pste3g01182 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Pste3g01182 638 MobiDBLite consensus disorder prediction 403 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01182 Pste-Chr3 7525726 7545870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01182 102 555 Core Cell Cycle Gene Families AT5G10270 66.799 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste3g01182 Pkinase 2.5e-63 CL0016