Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01178 CTCCCTCCATTCGATGTTCTCTTCCCAATGTGACCATTTCTTTCTTCTCTCTTCTCCTCTTCGCTCTGCAACACTTTCCTTTCCTTTCTCAGCCAAATACATAACCTCTCTTCTTTTCAAGCCAAGTAAGTACGGAACTCATCTAACTGGTACCTCAAAAGCAGTGACAATAAGAGTGTTGGGTGAAGTGGTGGTAGTTTGATAGACATTTGTTGGATTTGTTCTGAATACTTCTTGAAAGTCTTACATTGCTGCTGCACTGCAAAATTGTGCATAGACCTGGATCCAATGGACTTGAAGCCAAATCTTAATCCTGTCCTTACTGATGCCACACCCTTAACAAGGTCAAGGCTGGGTGGTGTACCTTCTGGTTTGTCACCTTACTCTCCTAAGGGGGCAACCTTTCCCCATGGTCCCTTGCTGGCAATTCCAAGGAAGAAGACTGGAATTCTTGATGATGTTCGTTCTAGCTGTTGGCTGGATGCCATGAAATCATCCTCTCCTACTCACAATAAAGTATCCAAGGATGTTAGTCATGGAATAGGATCACCTGATACTGCTTATAGTACCTGGCTGCTAAAGTTTCCATCAGCACTTGCATCTTTTGATCAAATTGCTAACTGTGCAAAAGGGAAGAGAATAGCATTGTTTCTCGATTATGATGGGACTCTTTCACCCATTGTGGACAATCCTGATTGTGCTTTCATGTCAGACAATATGCGTGCTGCTGTTAAAAAAGTGGCGGAATATTTTCCAACTGCAATAATTAGTGGAAGAAGCCGTGACAAGGTATGTGAACTTGTTGGAGTAAGTGAGCTATATTATGCTGGTAGTCATGGCATGGACATTATTGTTCCTCCTAGGCAATCTATTTCTGATAATCACCCTGATGGCATTAGGTCTTCTGACAAGCAGGTACTTGGGTTGCTCAAGGAGTCTATGAAAGACATTGAAGGAGCAATAGTTGAGAGCAATAAATTTTGTGCTTCTGTACATTACCGCAATGTAAATGAAGAGAGTTGGCAAATTGTGGGACAACGTGTATACGATGTTCTGAAGCAGTATCCACGTTTGCGTTTAACTCATGGCCGGAAGGTTTTAGAGGTTCGGCCAGTAATTGACTGGGATAAGGGCAAAGCTGTCACATTTTTACTTGAGTCACTTGGACTTAACAATTGTGATGACGTGCTAGCTATATATGTTGGAGATGATAGAACTGATGAAGATGCATTTAAGGTTTTGAGAGAACTTAATAAAGGTTGTGGCATCTTAGTGTCCTCTGCCCCAAAAGACAGCAACGCAATTTACTCTCTTCGTGATCCTTCAGAGATTTTCCATGAGGCCTGCTGGAACATATTTGAGCTCAGAAGGCCTCTGACGATAGCAACAACTTGTCATTACTCAGTTGCTTTGCTCAAAGCTTGT 1425 0.4225 MDLKPNLNPVLTDATPLTRSRLGGVPSGLSPYSPKGATFPHGPLLAIPRKKTGILDDVRSSCWLDAMKSSSPTHNKVSKDVSHGIGSPDTAYSTWLLKFPSALASFDQIANCAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVCELVGVSELYYAGSHGMDIIVPPRQSISDNHPDGIRSSDKQVLGLLKESMKDIEGAIVESNKFCASVHYRNVNEESWQIVGQRVYDVLKQYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNNCDDVLAIYVGDDRTDEDAFKVLRELNKGCGILVSSAPKDSNAIYSLRDPSEIFHEACWNIFELRRPLTIATTCHYSVALLKAC 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01178 379 MobiDBLite consensus disorder prediction 1 26 - -
Pste3g01178 379 NCBIfam trehalose-phosphatase 115 349 IPR003337 GO:0003824|GO:0005992
Pste3g01178 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 31 348 IPR044651 GO:0004805|GO:0005992
Pste3g01178 379 SUPERFAMILY HAD-like 119 350 IPR036412 -
Pste3g01178 379 Gene3D - 200 276 - -
Pste3g01178 379 FunFam Trehalose 6-phosphate phosphatase 206 355 - -
Pste3g01178 379 FunFam Trehalose 6-phosphate phosphatase 206 276 - -
Pste3g01178 379 Gene3D - 120 342 IPR023214 -
Pste3g01178 379 Pfam Trehalose-phosphatase 121 346 IPR003337 GO:0003824|GO:0005992
Pste3g01178 379 CDD HAD_TPP 119 347 - -
Pste3g01178 379 NCBIfam HAD-IIB family hydrolase 120 319 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01178 Pste-Chr3 7506126 7511830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01178 114 349 Trehalose Biosynthesis Gene Families AT1G70290 24.031 2.45e-07 50.8