Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01177 ACTATGTATAATTGTTGTCTACTTGTTCCATTATAGTTGCAGTAGAGAAAGTCTTGTGTTGAAATAAAGGGATACCCGTGATTTTTTCTATGATCCAAGAAGCTGGATTCAGTATCTGCAAAGAGACATGAAACGCGTGTTGCTGAGATACACCTAAAAGAAACCTTTGATAAAGTTGCATAACCTTTCCAAACTCAGAAGCAAGTCACTGATTAAGGCAAAAAAAACTCCAAACATCACGAAACACCTTGAAGTGACACCAATAATTTGACAAACATCTGTCCAATAGTTCCTTTGTAAGTGTAACACTTGGAATTCAAAATCATTGAGTAGCAAATGATTAGTGCTTTTGCTTCTTCCTCAAACTTTTCTTCTTTGGATTCTTCTAAAAAATATGATGTTTTCATAAGTTTTCGAGGCGAGGACACTCGCACAAACTTCACAAGTCATCTTTATGAAGCTTTGAAGCAAAGGAAGGTTGAAATCTATATAGACTACCGGCTTGAAAGGGGAGAAGAAATCTCACTAGCACTCATCAAAGCCATCAAAGATTCTCATATATCTATCATCATTCTGTCAGAAAACTATGCTTCCTCAAAGTGGTGCTTGGAAGAACTCAACGAGATTCTAGATTCCAAGAAAAATCATGGACAAATAGTGATACCGGTATTCTACAACATAGATCCATCCCATGTGAGAAATCAGAGTGGAAGTTTTGGCCAAGCCTTTGCAAAACATGAGGGAGAACCCAAACTCAACAAATGGAAAGCTTCTCTCATCGAAGTAGCGAAATTATCTGGATGGGACTCTCGAAACAGGATTGAATCTGATCTCCTTAAGGACATTATAGGAGATGTTATGCGAAAATTGACTCTTAGGTATCCAAACGAACTTAGAAACCTAGTTGGGATTGAGGATCATTATAAAGGGATTGAAGCACTACTAAACTCAAATGAAGTTAGAACCATTGGATTATGGGGCATGGGAGGCATAGGAAAAACGACTATTGCTAGTGCTTTATATGCTAAATTGTCTTATAAGTTTGAAGGTCGTTGCTTTCTAACAAATGTAAGGGAAAGATCAAACAAGGAAGGAGTTGAAGCTTTACACAATACACTTTTTTCTAAATTGTTAGACAACAAAAATTATTGTTTTGATGAACCCTTTTCAATATCCACTTTTGTCATGCATAGGCTTGGATGTAAAAAAGTTCTAATTGTGTTGGATGATGTGGATACACCAGAGCTATTAGAATACCTGACTGAAGGTTTTGATTTCTTAGGAGAAGGAAGTAAAGTCATCATTACAACTAGATATAAACAAATATTTAATCAAGTTGATGAAGTATATTATGTTAAGGAATTAAGTTGGCATCACTCTCTTCAGCTTTTTTGTTTGACTGTTTTTGGAAAAGAACAACCTAAATTGGGATATGAAGATCTATCAAGAAGTGTAATTTCGTATTGCAAAGGTAATCCTTTGGCTTTAAAAGTTTTGGGTGCTATTCTGCGTCGAAAAAGTATAGAGGCATGGAAAAGTGAATTGAGGAAACTCCAAGAGACTCCAAATATGAAAATTCATGACATATTGAAATTAAGTTATGAGGACTTAGATCTTTCTCAAAAAGATATCTTTTTAGACATTGCATGCTTCTTCAAAGGGGAAGATATAGATTCAGTAAAAAATGGAAGTGATGCTGTTGAAGGTATAATTTTAAATTTGGATACCTTACCTCAAGATCTACATTTGAGCCCAAATGCTTTTGCAAAAATGACTAATGTGAGATTTCTTAAAATCTATAGAGAGCACCATTATAGAGGGAGAGTAGAACGATTTAATGTGTACCTTGATAATGGTCTAGAGTCATTATCTCATAAATTGAGGTACCTATGGTGGGAAGGATTCTGGCTTGAGTCTTTGCCATTTAACTTTTGTCCTGAACAACTTGTAGAACTTTGCATACCTGGTAGCAAGCTTAAAATGCTATGGGATGGTGTTCAGAATGTGGTGAATTTAAAAAGAATTGACCTTGAGGGCTCGAGAGACTTAATTAAGTTGCCAGACTTATCCAAGGCAGAAAAATTGGAAAGTATTTGTGTTTGTTATTGTGAAAGCTTGCATCTGCTCCATCCATCTGTATCATCTCTTCCCAAGCTTACCTATTTGTGTTTAAGTTACTGTAGAGAGATTAAAAGCATTGATGTTCATTCAAAATCACTTCGTAATTTGATTCTCAATGAATGTTCATCTCTTAATGAACTATCAGTAACATCAAAGGAGATGACGATGTTGAACTTATCTAACACTCCTATATGTACATTGCCTTCAACAATCTCACAAAATAAGAAGCTTGCTTGCCTTTGGCTAAATGGATGTAACTTTATTGACAAGTTATCCTTACAGACACTTCTTCACAACATTGGCCACTTTTCTTCTTTAGAATTTTTAGGCCTTGAAGAAACTAATATTGAGAGCTTACCTACAAGCATAAAAAGCCTTTCCTCATTGACATGTATCGAATTAAGTAATTGTAGAAAACTTGTGTCTTTACCAGAACTTCCACCATCCCTGAGAGAACTTGAGTTACAATATTGCACAAAACTCATGTCTCTGACAAAATTTCCACCATCTTTGGAACAGGTGGATGCATCTAACTGCACTTGTCTAGAGGAAAACTTTACTCAACAGTTAGTGTTACAACACATGTTACAAAGTCACATTACGTACTTAGAGCAACAATATTCTAAGGGTTATCATGAAGACTATTCATTTTATTTGTTCCCAGGAGAACATGTGACAAAGGAGTGTAGATTTCATTCGGTAGGGAGTTCAATAACTATTCCTCATCTTCCACTGCCATCTCACATTTGCGGTTTCATTTATTGCGTGATTCTTCCTAAGGGGTTATTCAAGTATCTTATTGTTAGAATCGTTAGTTATATATATCAAGATGGTGAAAAGGTAGGTTTTGGCCCCAGATTCTTATTCGGTAAAGATTTCAATTCAGATCATCTGATGCTTTATTATGAAAAAAAATTGGATGCTTTAAATTGCAATTTACCATTTAAATTTGAATTTTCTTTGAAGAATGGGTTAGAACCCCACGATGATGGAATAAAAGAGTGTGGGGTCTTCCCAGTATATAAATTAGAATCGGGGTACAAGGTGCTTGTCAGTGGTAACACAAAAATATTTGACATGGAATCCACTATTCAAATCTCTTTAAGTCAAACATCAGAGCAACTCAACTGGAGTTGA 3258 0.3536 MISAFASSSNFSSLDSSKKYDVFISFRGEDTRTNFTSHLYEALKQRKVEIYIDYRLERGEEISLALIKAIKDSHISIIILSENYASSKWCLEELNEILDSKKNHGQIVIPVFYNIDPSHVRNQSGSFGQAFAKHEGEPKLNKWKASLIEVAKLSGWDSRNRIESDLLKDIIGDVMRKLTLRYPNELRNLVGIEDHYKGIEALLNSNEVRTIGLWGMGGIGKTTIASALYAKLSYKFEGRCFLTNVRERSNKEGVEALHNTLFSKLLDNKNYCFDEPFSISTFVMHRLGCKKVLIVLDDVDTPELLEYLTEGFDFLGEGSKVIITTRYKQIFNQVDEVYYVKELSWHHSLQLFCLTVFGKEQPKLGYEDLSRSVISYCKGNPLALKVLGAILRRKSIEAWKSELRKLQETPNMKIHDILKLSYEDLDLSQKDIFLDIACFFKGEDIDSVKNGSDAVEGIILNLDTLPQDLHLSPNAFAKMTNVRFLKIYREHHYRGRVERFNVYLDNGLESLSHKLRYLWWEGFWLESLPFNFCPEQLVELCIPGSKLKMLWDGVQNVVNLKRIDLEGSRDLIKLPDLSKAEKLESICVCYCESLHLLHPSVSSLPKLTYLCLSYCREIKSIDVHSKSLRNLILNECSSLNELSVTSKEMTMLNLSNTPICTLPSTISQNKKLACLWLNGCNFIDKLSLQTLLHNIGHFSSLEFLGLEETNIESLPTSIKSLSSLTCIELSNCRKLVSLPELPPSLRELELQYCTKLMSLTKFPPSLEQVDASNCTCLEENFTQQLVLQHMLQSHITYLEQQYSKGYHEDYSFYLFPGEHVTKECRFHSVGSSITIPHLPLPSHICGFIYCVILPKGLFKYLIVRIVSYIYQDGEKVGFGPRFLFGKDFNSDHLMLYYEKKLDALNCNLPFKFEFSLKNGLEPHDDGIKECGVFPVYKLESGYKVLVSGNTKIFDMESTIQISLSQTSEQLNWS 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01177 973 SMART till_3 19 153 IPR000157 GO:0007165
Pste3g01177 973 Gene3D - 14 178 IPR035897 -
Pste3g01177 973 SUPERFAMILY L domain-like 469 783 - -
Pste3g01177 973 Pfam NB-ARC domain 199 423 IPR002182 GO:0043531
Pste3g01177 973 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 156 IPR035897 -
Pste3g01177 973 Gene3D - 179 340 IPR027417 -
Pste3g01177 973 Pfam TIR domain 19 185 IPR000157 GO:0007165
Pste3g01177 973 ProSiteProfiles TIR domain profile. 18 178 IPR000157 GO:0007165
Pste3g01177 973 Gene3D Ribonuclease Inhibitor 649 803 IPR032675 -
Pste3g01177 973 Gene3D Ribonuclease Inhibitor 458 648 IPR032675 -
Pste3g01177 973 PRINTS Disease resistance protein signature 210 225 - -
Pste3g01177 973 PRINTS Disease resistance protein signature 377 391 - -
Pste3g01177 973 PRINTS Disease resistance protein signature 286 300 - -
Pste3g01177 973 PRINTS Disease resistance protein signature 719 735 - -
Pste3g01177 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 643 IPR044974 GO:0006952
Pste3g01177 973 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 180 - -
Pste3g01177 973 Gene3D - 343 426 IPR042197 -
Pste3g01177 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01177 Pste-Chr3 7495675 7509714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01177 451 724 WRKY Transcription Factor Family AT4G12020 36.364 8.90e-28 119