Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01164 ATGGATTGCGACAATGGTGTAGGAGAGGTGTGTCGTGGGCCATTGGATTGGTGCAGGGAGGAAGAGGAAACAATGGCAATGGCGAAGAGGAAACAGAGGAGAAGAGAAATGGATAATATTCTGGAGGCAGATGTGAATAAAATATCTCAGCATTCCTCATCTTCAGTTGTTGCTCTGGCAATCAAGGGTAGCAAGAAAAGCAAATATGTGGTACAGTGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTATCTTCAAGCTGATACATGTCCATGCTGGTATAAAAGGAGTTCCAACGCCATTGGGAAATGTGATCCCTCTTTCACAAGTGCGTAATGATGTAGCAACTGCATTCAAAAAGGAAGTGGAGTGGCAAACAGATCAAATGCTTCTACCTTTCAAGAGAATGTGTGAGCAAAGAAAGGTTCACGTAGAAGTTATAGTGATTGAATCAGATGATGTGGCAACTGCAGTAGCAGAGGAAGTAGCTAAGGGTGTTATAACCAGACTTGTTGTTGGAGCTTCATCTAGTGGCATATTTAAAAGTAAACAGAAAGGTGTGTCAAAGAAAATATCAGTATGCACTCCAAGATTTTGTACCATTTATGCTATTTCAAAGGGAAAACTATCCATACGGCCATCAGACATGCCAATTGATGGAAGCATTATAGATGATGCTAGTGAAACCAGTTTGTCCTCCAGCAGCTCATCTAACTACACTTCCAACTCTCAGTCAGAATCTGCCTCAGTTTTGTCATATGCTGGTTTACACTCCTCTTCCCTGGCAACACAACGATTTCAAGCTCTTTCAAGTATAAATAGTGCCCTTCTAAGCACAACTTCGAGTTTGACTGACACTAACCATTCTAGAGGCCAATCTATAGATCTTGGGAGAGAAAATACTGCTACAAGTTCTGCCAGAAACTCGGACATTGATCGTACCTTAAGTCGGGTCTCTAGTTGCAAAAGCTTTATTTCAGATACTGAATCTTGGATGTTTGATCAAAATTCTAGCAAGGATGTGCCACTAACAACTACACTTCCATCACCTAATAGGCAGGCAAAATTTAACCTTGAGCTGGAGAAGTTGAGGATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAAGTGAGAAAACTGAAGCATCCCGAAAGCTGAATGACCTCAGCAAGAGACGTTCAGAGGAAACCATGAAAATGAAGGAGATTATTGCTAAGGAAGAGAAGGCAAAAGAATTAGCAAAACTAGAAAGAGAGAAATATCAAGATGCATCAAGAGAAGCTGCATATTTGAAAGAAAGTGCTGAAAGAGAAGCATCTGAAAGGAAAGAAACAGAGTTGAAAGCCATTCGTGCTGCAAAAGAGAAAGAAAAGCTAGAGGATGCTCTAAGTGGTTCTACGCCCCAGTACCGGAAGTTTACATGGGATGAAATAGTCTCTGCTACTTCATCTTTCTCTGAAGATCTGAGAATTGGAATGGGAGCATATGGAACAGTGTACAAGTGCAATTTGTATCACACAACTGTTGCCGTGAAAGTTCTCAACACTAATGAAAACCGCAAAAGCAAGCAATTCCAGCAGGAGTTAGAGATTTTAAGCAGAATTCGTCATCCGAACTTGCTTCTTCTTCTTGGTGCGTGTCCTGACCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAACTTGGAGGACAGGCTACTACGGAAAAACAACACTTCCCCAATCCCATGGTTTGAGAGGTTTCGAATAGCTTGGGAAGTTGCATCAGCTCTCGCCTTTCTTCATAGCTCACAGCCAGAACCTATCATTCATCGTGACTTGAAACCAGCAAACATCTTGCTTGGTCGTAACCTTGTCAGCAAGATTGGTGACATTGGCCTTTCTACAGTGCTCCATTCAGATAATTTGTCTACCATGTATAAGGACACGGCGCCTGTTGGAACACTCTGCTACATAGATCCTGAGTACCAAAGGACTGGGTTAATATCTCCAAAATCTGATGTTTATGCTTTTGGAATGGTGATCTTACAGTTACTGACATCAAAACCAGCTATAGCACTTGCTCATAAGGTTGAAACAGCAATTGATGGCAGGATTTTAACAGATATATTGGACCCAGGGGCAGGAACTTGGCCATTTCAAGAGACACTAGACTTGGCTTTGTTAGGACTGAACTGTGCAGAACTTCGGCGTAAAGACCGGCCTGATTTGAAAGATCATGTACTTCCAACACTAGAGAGATTGAAAGAAGTTGCTGATAGGGCCCAACATCCTGCTTCAATTTGTACTATTAAACCCAAACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGCTTAAAGAGAATGACAAATCACCAATGACAAACATGGCTTTACCTCATAAGCATTTAATTCCTAACTACACACTTCTGTCAGCAATTTTGGAGTGGAAGTCCAAAGAATCATGATATCAGAATTATCTTTCTCCATTTTGATAGAGACCAATTATACTTGTAGTGCAGGGAGGGTGGCTAGAATGTTCAGTATGTATGACATGTAGCAGTGTCTTGGATTCAGTTTTTATTTCTTTTAGTTGTTCCATCCTAAGAATATTGTTTGGTTAACTTAGGTAGATTAACTTACAACTGTAGATAAATTTGATTCAATTTTCAGATTGTGTATGCATAGGTCAAATTTTGTTCTTTACGATATATAATAAATAAAATAAGAGGTCATAGTTACACGC 2807 0.4051 MDCDNGVGEVCRGPLDWCREEEETMAMAKRKQRRREMDNILEADVNKISQHSSSSVVALAIKGSKKSKYVVQWALNKFVPEGMIIFKLIHVHAGIKGVPTPLGNVIPLSQVRNDVATAFKKEVEWQTDQMLLPFKRMCEQRKVHVEVIVIESDDVATAVAEEVAKGVITRLVVGASSSGIFKSKQKGVSKKISVCTPRFCTIYAISKGKLSIRPSDMPIDGSIIDDASETSLSSSSSSNYTSNSQSESASVLSYAGLHSSSLATQRFQALSSINSALLSTTSSLTDTNHSRGQSIDLGRENTATSSARNSDIDRTLSRVSSCKSFISDTESWMFDQNSSKDVPLTTTLPSPNRQAKFNLELEKLRIELRHAQGLHAVAQSEKTEASRKLNDLSKRRSEETMKMKEIIAKEEKAKELAKLEREKYQDASREAAYLKESAEREASERKETELKAIRAAKEKEKLEDALSGSTPQYRKFTWDEIVSATSSFSEDLRIGMGAYGTVYKCNLYHTTVAVKVLNTNENRKSKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNNTSPIPWFERFRIAWEVASALAFLHSSQPEPIIHRDLKPANILLGRNLVSKIGDIGLSTVLHSDNLSTMYKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTSKPAIALAHKVETAIDGRILTDILDPGAGTWPFQETLDLALLGLNCAELRRKDRPDLKDHVLPTLERLKEVADRAQHPASICTIKPKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLKENDKSPMTNMALPHKHLIPNYTLLSAILEWKSKES 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01164 842 Gene3D HUPs 42 187 IPR014729 -
Pste3g01164 842 SUPERFAMILY Protein kinase-like (PK-like) 469 743 IPR011009 -
Pste3g01164 842 PANTHER OS02G0152300 PROTEIN 56 836 - -
Pste3g01164 842 CDD STK_N 56 208 - -
Pste3g01164 842 SUPERFAMILY RING/U-box 770 840 - -
Pste3g01164 842 ProSiteProfiles U-box domain profile. 771 842 IPR003613 GO:0004842|GO:0016567
Pste3g01164 842 Gene3D Transferase(Phosphotransferase) domain 1 561 766 - -
Pste3g01164 842 Coils Coil 402 430 - -
Pste3g01164 842 ProSiteProfiles Protein kinase domain profile. 488 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01164 842 Gene3D Phosphorylase Kinase; domain 1 456 560 - -
Pste3g01164 842 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 771 842 IPR013083 -
Pste3g01164 842 CDD RING-Ubox_WDSUB1-like 773 827 - -
Pste3g01164 842 SMART Ubox_2 775 837 IPR003613 GO:0004842|GO:0016567
Pste3g01164 842 MobiDBLite consensus disorder prediction 283 313 - -
Pste3g01164 842 Pfam Protein kinase domain 491 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01164 842 Pfam U-box domain 773 840 IPR003613 GO:0004842|GO:0016567
Pste3g01164 842 SMART serkin_6 488 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01164 842 ProSitePatterns Protein kinases ATP-binding region signature. 494 515 IPR017441 GO:0005524
Pste3g01164 842 Coils Coil 361 395 - -
Pste3g01164 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Pste3g01164 842 Coils Coil 443 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01164 Pste-Chr3 7400164 7410284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01164 54 839 U-box Gene Family AT4G25160 52.670 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste3g01164 Pkinase 1.7e-40 CL0016