Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01131 GTAAAATGGACCCCTACGTGATCCTCATGTGTCGCACTCAGGAGCAAAAAAGCAGTGTTGCATCAGGTCAAGGAAGTGAACCAGACTGGAATGAGAATTTTATATTCAACGTGTCTGAAGGCGTTTCCGATCTGAGATTGAAGATCATGGACAGTGATTCCACGACGGCTCATGATCTTGTTGGAGAAGTTACCATTCCACTTAATGCCTTGTTTAGTGAAGGAACTATTCCACCTACTCCATACAATGTTGTTAAGGATGGCAAATATTGTGGGGAGATTAAAATTGGCCTCACTTTTACGCCTCAGGGTCGCACCGAGCGCTGCCTGGAAGAAGATTTTGGAGGATGGAAAGAGTCTGGTTACCGACACTAATTGTCTTCGTTTAAAGGATTTTTTTACTCTTAACAGTATCAGGATCTTGATAGCTGGCTATTCAAGAGGGTTTCACTCTTTAATTGCTTTTTTTATCAGTTTATTACCATCAACTCTAAATAAATCATCGGTCAA 509 0.4126 MDPYVILMCRTQEQKSSVASGQGSEPDWNENFIFNVSEGVSDLRLKIMDSDSTTAHDLVGEVTIPLNALFSEGTIPPTPYNVVKDGKYCGEIKIGLTFTPQGRTERCLEEDFGGWKESGYRH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01131 122 SMART C2_3c 2 78 IPR000008 -
Pste3g01131 122 Gene3D C2 domain 1 101 IPR035892 -
Pste3g01131 122 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 101 IPR035892 -
Pste3g01131 122 PANTHER C2 DOMAIN-CONTAINING 1 101 - -
Pste3g01131 122 Pfam C2 domain 1 73 IPR000008 -
Pste3g01131 122 ProSiteProfiles C2 domain profile. 1 79 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01131 Pste-Chr3 7228914 7230864 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01131 2 95 C2H2 Transcription Factor Family AT4G21160 28.723 1.91e-07 46.2