Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01129 ATGAGTAGCATGACAAGTGGGGGTGATACTCGGAAAATATCCAAAGGTCGTCGGTCTTCTTCGTTTGAAAAAGAGAAAGAAGCTGGAACGGGAGGTGATGCTCCTCTAAAGAAAGGTCCATGGACTGCAGCAGAGGATGCAATTTTGGTTGAATATGTCAAAAAGCATGGACAAGGCAATTGGAATGCAGTGCAAAAGCATTCAGGTCTTGCCCGTTGTGGGAAAAGCTGCCGTCTTCGATGGGCAAATCATTTGAGACCGGATCTCAAAAAAGGTGCATTCACTGTAGAGGAAGAGAGTCGAATCCTTGAACTCCATGCTAGGATGGGAAACAAATGGGCTCGAATGGCAACAGAGTTGCCTGGGCGTACTGACAATGAGATCAAGAACTATTGGAATACAAGAATCAAAAGAATGCAGAGAGCTGGCTTACCAATTTACCCAGATGAATTGTGTGAACGCTTAACGAATGGTAATCTAAAAAGTCAAAATGTTGGTACCTTCACAAATGAAGCCTCTCAACATATTGATCTCTCACAAACTAACAATTTTGATGTAGCAGATATGGAATTAAAAAATTTTCAATTGCATCGTGGTATATCACATGCACTGCATGCACCGTTTGTTGATATGAACGAAAGCAACATGTTTGAACAAAGTTCAGACTCATCCCACACTTGTAACTTCTTGTTTCCAACTATGTGTTCTTCAAAAGATCACCGGGAGTCAGAAATGTCAGAAATTCTGTACAATAGTTTTGACAGTTGTACAAGTAATGTGGTCCCTCTATTTGATCAGTACTACGGCTACACTTGTGAAAAAATTTCTGACCATCCTAGGTTGTTGTTTACCCCATGTGATCCTGTTGTTAACACTAGTGATCAGTTTAACAGTGATAACCTTACTGGCAGCCATGCCACATTAAATGGCAACGCCTCTTCTTCTGTGCCCATGTCTGAGGCCATGAAGTTGGAGCTCCCTTCACTCCAATATGCAGAGAATCAAGATGGTAGCTGGGGCACACTTACGTCCCCACTTCCCTCTCTTGAGTCTGTTGATACATTTATTCAGTCTCCTCTAGTTGAACCTATTTTGTCTGATCCCATTTCTCCACCGAATAGTGGTTTGCTGGAAGCTATAGTTTACCACTCGAATAGCATGAAAGACTCAAGCAATGATTTATTATTGCAAGAGACAATGGTTAGTGCACACCAAACAGCCAAATCAAACAATGATTTATTATTGCAAGAGACAACGGTTACAGCACACCAAACAGCCAAAAGTTCAACCTTCAATGATCTTGTCAAGACAGAATGGGATGAACTAGGAGAGCCAAACTCGCCATTGGGTCAAGCTGCTTCAGTTGTGACGGACTATGCTCCTATAAGCATGTGCTCAGTGGATGGACGGCAGTCGCGTGAAACCACTCCAGATCTTGATGACGAGCATGAAGCACTCACCCACTTACTAGGTAGTTTCAGGAAAAAAAGAAAACCAAAACAAATAGATTATATGCGGCCTGATGCATTACTTGACTTAGGTTGGTTTGGGAATAACACTGAGTATGGAAGTAATGAATCTAAATCTGTGTTAAAAGATGGTTTAAGTGCATTTATTGGTGAAGATTGTAAGAGTCCGCGGTAGCAAGTTGCTTGATATGGATATATTGTTTTGGCTATAGGGTAGTGCTTCTTCATTGTTATAACTTCATTTTGTTTTGGTTAACTTTCCAAACATTTTTAGATAATTTTTTTAATTCTCAGAACCTTTAGTATCTTGTGTTGTGTGATGATCGAAGACTTTATGACATGTATTTCAATTTTATTGATGTTGGTGGTATCCATCTGTTACTCTTACATGTTAGAAGATTGGTATTTGAAAATTTT 1886 0.4014 MSSMTSGGDTRKISKGRRSSSFEKEKEAGTGGDAPLKKGPWTAAEDAILVEYVKKHGQGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTVEEESRILELHARMGNKWARMATELPGRTDNEIKNYWNTRIKRMQRAGLPIYPDELCERLTNGNLKSQNVGTFTNEASQHIDLSQTNNFDVADMELKNFQLHRGISHALHAPFVDMNESNMFEQSSDSSHTCNFLFPTMCSSKDHRESEMSEILYNSFDSCTSNVVPLFDQYYGYTCEKISDHPRLLFTPCDPVVNTSDQFNSDNLTGSHATLNGNASSSVPMSEAMKLELPSLQYAENQDGSWGTLTSPLPSLESVDTFIQSPLVEPILSDPISPPNSGLLEAIVYHSNSMKDSSNDLLLQETMVSAHQTAKSNNDLLLQETTVTAHQTAKSSTFNDLVKTEWDELGEPNSPLGQAASVVTDYAPISMCSVDGRQSRETTPDLDDEHEALTHLLGSFRKKRKPKQIDYMRPDALLDLGWFGNNTEYGSNESKSVLKDGLSAFIGEDCKSPR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01129 547 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 17 527 - -
Pste3g01129 547 SMART sant 37 87 IPR001005 -
Pste3g01129 547 SMART sant 90 138 IPR001005 -
Pste3g01129 547 CDD SANT 40 85 IPR001005 -
Pste3g01129 547 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Pste3g01129 547 MobiDBLite consensus disorder prediction 1 39 - -
Pste3g01129 547 FunFam MYB-related transcription factor 37 90 - -
Pste3g01129 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 140 IPR017930 -
Pste3g01129 547 Gene3D - 37 90 - -
Pste3g01129 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 89 IPR017930 -
Pste3g01129 547 MobiDBLite consensus disorder prediction 11 32 - -
Pste3g01129 547 FunFam Transcription factor GAMYB 93 139 - -
Pste3g01129 547 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Pste3g01129 547 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Pste3g01129 547 CDD SANT 93 134 IPR001005 -
Pste3g01129 547 Gene3D - 93 164 - -
Pste3g01129 547 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Pste3g01129 547 SUPERFAMILY Homeodomain-like 35 132 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01129 Pste-Chr3 7219670 7224787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01129 31 542 MYB Transcription Factor Family AT3G11440 36.262 1.37e-83 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g01129 Myb_DNA-binding 8e-15 CL0123