Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01115 CCCATCATCACCTTCAGGCCTTTTATGCCATGGAATCAATGGTGAAACCAAAACCCTAATCTCCTTCTTCTCATTCTAATTTCCATAACACAGTTTCTCGTTCTGCCGCCGAAGAACCTCGTGTCCGAGCATAGCATCGGCGAAGATTCAGTAACAAATGGCCTCGGAAAAGAAACTCTCGAATCCAATGCGAGAAATCAAAGTGCAAAAACTCGTTCTCAACATCTCCGTCGGCGAGAGCGGTGATCGTCTCACCCGCGCTTCCAAGATCGCTTGTTATGTGACAGTGAGAGGTGACAAAGCTATGCAGCTTTTGGAGAGTGGTTTGAAGGTCAAGGAGTACGAGCTTTTGAGGAGAAACTTCAGTGACACTGGCTGCTTTGGATTCGGCATTCAGGAGCACATTGACTTGGGAATCAAGTATGATCCTTCCACTGGTATTTATGGAATGGATTTCTTTGTCGTCCTGGAGCGCCCTGGTTATCGTGTCGGCCGCCGCCGTCGGTGCAAGGCTCGTGTTGGGATCCAGCATCGTGTAACGAAGGAGGATGCCATGAAGTGGTTCCAAGTTAAATATGAAGGTGTCATCCTAAACAAAGTTCCTCACTCTGCTGCTGCAAAAAACTCGTTTCCGAGCATAGGCGAAGCATTCCGTTCGATTCTGTCACAAATGGCCTCGGAAAAGAAACTGTCGAATCCAATGCGAGAAATCAAAGTGCAGAAGCTCGTCCTCAACATCTCCGTCGGCGAGAGCGGTGATCGTCTCACTCGTGCTTCCAAGCTTTTGGAAAGTGGTTTGAAGGTTAAGGAGTACGAGCTTCTTAGGAGAAATTTCAGTGACACTGGCTGTTTTGGATTCGGTATTCAGGAGCACATTGATTTGGGAATCAAGTATGATCCTTCCACTGGTATTTATGGAATGGATTTCTTTGTCGTCCTGGAGCGCCCTGGCTATCGTGTTGGTCGCCGTCGTCGGTGCAAGGCTCGTGTTGGTATCCAGCATCGGGTCACGAAGGAGGATGCCATGAAGTGGTTCCAAGTTAAGTATGAAGGTGTCATCCTAAACAAGTCCCAGGCTATTGTTGGTTAAATCATAAGTGCTACTTCTTTCCTCTGTTTATTATAGTTTCATGCTTCTTTTCTTGAATTAGTATGGATATCACTTCTACAGGTCAATTGAGCTGTTTCTTGACAATTTTTTTAATATCATTAAATTTTGAAGTCGATATTGATACCGACTCAAATGCTTCACATGTATTATTGTGTTTATCTACTTTCTACTTGAAATTTAATTACATAGGTAATAATAGATCAATGTTTTTGCTTAGTTTGATCAATGTGTTGGAAAGATAGTTGATTTTGGAGATTTTGTGTTGTAGCAAATTTAAAGGTTAAAATGAGTAACCACTATTTTAGTCTGTG 1422 0.4346 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRASKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKEDAMKWFQVKYEGVILNKVPHSAAAKNSFPSIGEAFRSILSQMASEKKLSNPMREIKVQKLVLNISVGESGDRLTRASKLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIVG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01115 310 SUPERFAMILY RL5-like 179 301 IPR022803 -
Pste3g01115 310 Gene3D - 174 209 IPR022803 -
Pste3g01115 310 Gene3D - 3 36 IPR022803 -
Pste3g01115 310 FunFam 60S ribosomal protein L11 34 145 - -
Pste3g01115 310 Gene3D - 37 148 IPR022803 -
Pste3g01115 310 Gene3D - 210 305 IPR022803 -
Pste3g01115 310 Pfam ribosomal L5P family C-terminus 37 135 IPR031309 -
Pste3g01115 310 Pfam ribosomal L5P family C-terminus 205 292 IPR031309 -
Pste3g01115 310 SUPERFAMILY RL5-like 8 144 IPR022803 -
Pste3g01115 310 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 169 211 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01115 Pste-Chr3 7146704 7157543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01115 172 310 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 73.077 5.47e-87 256