Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01095 TTTGACAAATGGAGGCCTCAAAACATTTGCCTGTTGAAAGGAATTGGATCCAAGGGAGAGAGGATACAACTATTAGCTAACCATTTTAGAGTTGGCATGAGCAAGAATGATGTTTACTTCTACCATTATGATGTTGCTATGAGTTATGAAGACAAGAGCCCTGTTGTAAACAAGGGTATTGGGAGAAAGGTCCTAGACCAACTTTGCAAAATATATGTTGAAATGAGAAACATAAGTTTTGCATATGATGGTCAAAAGAGTTTATTCACTCTTGTTCCTCTACAAAAGCAGAGGCTTCAATTCACTGTTGTGTGCAAAACAATCATTGTGGATATCAAATCTACCACCAAAGTCCCATTGCAAGCAATTGCTGATGCATTGGGTGGTCAGGATTCTGAGAACTCTCAAGAAGCTCTGAGGGTTTTAGACATCATACTGAGACAACATTCTGCAAACCAGGAATGCCTCCTTGTTCGCCAATCCTTTTTTCATGACAGCACAAGTTTTGATGTTGGAGGAGGTGTGAAATGCTGTCGTGGTTTTCATTCAAGCTTTCGAGCCACACAAGGAGGTTTATCTCTCAACATTGATGTGTCTACTACAATGATTGTAAAGCCTGGCCCTGTGGTGGACTTCCTTCTGCAAAATCAGAATGTTAAGGATCTAACTTCAATTGATTGGACCAAGGCAAGAAGAATGCTGAAGAACCTTAGAATCAAGGCTAATGGTCTTGAGTTCAAAATCACTGGACTGAGTAATAACACTTGCAGGAATGAAAAGTCAAAGGGTGCAAATGGTGGAGAAAGGGAAATAACGGTTTATGACTACTTTAAAGACTATAAAATGATTAGCCTGACATACTCTGCTGATATGCCATGCATCAATGTTGGCAAACCAAAACGCCCTTGTTATTTTCCAATAGAGCTATGTGAATTGGTCTCATTGCAGCGGTACACCAAGGCACTAACAAATTTGCAAAGGGCTAAGCTTGTGGAGAAGACAAGACAAAAGCCCCTAGAAAGGAGAAAAGCTTTGGAAGATTCCTTGAGAAGCAGCAGATATGGTGATGAACCTATGCTTAGCTCTTCTGGTATTACCATCGATCCTAACTTTACTAGACTAGAGGGTCGCATATTGCAGCCGCCAAAGCTTATAGTTGGAAGGAATGAGAATATTGTTCCACGGAATGGACGCTGGAATTTCAACAATAAGGAGCTATATTGTCCTATTAAGATTGACCGTTGGGTCATTGTAAACTTTTCAATTGCGTGTAAAAACTACACATCAAATTTGGTTGAACTCATGATGCGGTGTTCTAAAGCTAAAGGGATGGCACTGAATCCTCCATTTCGACAAGTATTTGAAGAAGATGGCAACGATAGAAATAAATCAGCTCCTGTAAGGGTAGAGAAAATGTTTGAAAAGTTGAAGAGGACTCTGAATCGTGAACCTCAGCTTCTGTTGTGCATTCTTCCAGAGAAAAAGAACTGTGATATTTATGGTCCGTGGAAAAGGAAATGTCTTGTTGATGAGGGGATTGTAACACAATGTATTGCACAAACAAAGTTTAATGATCAGTATATTACCAATGTACTCCTCAAAATTAATGCTAAGGTTGAGATGATTCAATCTCTATTCAAGCCTGTGCCTGATACTAATGGTGATGAGGGTATCATAAGGGAGATTCTATTGGACTTTTCCGAAACTTCTAATCAAAAGCCCGAACAGATTATAATTTTTAGGGATGGAGTGAGTGAATCACAGTTCAACCAGGTGCTCAACATAGAGTTATCTCAAATCATGGAGAAGAACCATCATACTAGGTTCTTCCAGACCAATAATGCTCGAGACAATGTTCCACCTGGGACCATTGTTGACAACACTGTTTGTCATCTCCAAAAGACTGATTTTTATTTGTGTGCTCAAGCTGGCCTGATTGGGACAACCCGACCTACTCACTACGTTGTTTTACATGATGAAATCGGGTTCTCAGCTGATGAAGTGCAGGGATTAGTGCATGATCTATCTTATACGTATCAGAGGAGCACAACTGCTGTATCATTAGTTGCTCCCATTTGCTATGCCCACTTGGCAGCTGCACAGATGGCACAGTTTATGAAGTTTGATGAATATTCTGAGACTTCTTCCAGCCATGGTGGAGTGGGATCTGCTGGTGCACCTCTGCTACCTCAGTTACCATCTCTTCATAAAAATGTTGTTAACACCATGTTTTTTTGT 2238 0.4026 FDKWRPQNICLLKGIGSKGERIQLLANHFRVGMSKNDVYFYHYDVAMSYEDKSPVVNKGIGRKVLDQLCKIYVEMRNISFAYDGQKSLFTLVPLQKQRLQFTVVCKTIIVDIKSTTKVPLQAIADALGGQDSENSQEALRVLDIILRQHSANQECLLVRQSFFHDSTSFDVGGGVKCCRGFHSSFRATQGGLSLNIDVSTTMIVKPGPVVDFLLQNQNVKDLTSIDWTKARRMLKNLRIKANGLEFKITGLSNNTCRNEKSKGANGGEREITVYDYFKDYKMISLTYSADMPCINVGKPKRPCYFPIELCELVSLQRYTKALTNLQRAKLVEKTRQKPLERRKALEDSLRSSRYGDEPMLSSSGITIDPNFTRLEGRILQPPKLIVGRNENIVPRNGRWNFNNKELYCPIKIDRWVIVNFSIACKNYTSNLVELMMRCSKAKGMALNPPFRQVFEEDGNDRNKSAPVRVEKMFEKLKRTLNREPQLLLCILPEKKNCDIYGPWKRKCLVDEGIVTQCIAQTKFNDQYITNVLLKINAKVEMIQSLFKPVPDTNGDEGIIREILLDFSETSNQKPEQIIIFRDGVSESQFNQVLNIELSQIMEKNHHTRFFQTNNARDNVPPGTIVDNTVCHLQKTDFYLCAQAGLIGTTRPTHYVVLHDEIGFSADEVQGLVHDLSYTYQRSTTAVSLVAPICYAHLAAAQMAQFMKFDEYSETSSSHGGVGSAGAPLLPQLPSLHKNVVNTMFFC 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01095 746 FunFam Protein argonaute 7 201 318 - -
Pste3g01095 746 Pfam N-terminal domain of argonaute 21 146 IPR032474 -
Pste3g01095 746 Gene3D - 600 746 IPR036397 GO:0003676
Pste3g01095 746 Gene3D - 378 548 - -
Pste3g01095 746 Pfam Piwi domain 487 543 IPR003165 GO:0003676
Pste3g01095 746 Pfam Piwi domain 601 707 IPR003165 GO:0003676
Pste3g01095 746 SUPERFAMILY Ribonuclease H-like 470 705 IPR012337 -
Pste3g01095 746 ProSiteProfiles Piwi domain profile. 540 707 IPR003165 GO:0003676
Pste3g01095 746 ProSiteProfiles PAZ domain profile. 246 314 IPR003100 GO:0005515
Pste3g01095 746 Pfam Argonaute linker 1 domain 158 204 IPR014811 -
Pste3g01095 746 Pfam PAZ domain 210 330 IPR003100 GO:0005515
Pste3g01095 746 SMART DUF1785_2 156 206 IPR014811 -
Pste3g01095 746 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 16 546 - -
Pste3g01095 746 SMART Piwi_a_2 486 707 IPR003165 GO:0003676
Pste3g01095 746 Gene3D paz domain 200 318 - -
Pste3g01095 746 SUPERFAMILY PAZ domain 201 353 IPR036085 GO:0005515
Pste3g01095 746 CDD PAZ_argonaute_like 206 313 - -
Pste3g01095 746 ProSiteProfiles Piwi domain profile. 486 539 IPR003165 GO:0003676
Pste3g01095 746 Pfam Argonaute linker 2 domain 340 384 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01095 Pste-Chr3 7017953 7026717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01095 540 746 Eukaryotic Initiation Factors Gene Family AT1G48410 40.964 6.87e-43 166