Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01079 AAAAATAGTAATATTAAAAACAGAGTATATATAAGCTGTGAAAGATGAGAAAGTAGCAACCAAAGTCCTTTCACTTTCCCTGTCTTTCATAGTTTTGACTGTTTCGAATCCCTGCCTTTGCTGAGGTGCTTCGTCAATTCTTCTTATCGCTTTTCTTCTTCAATTCCTCTTCCTGCTTTTTTCTCATCTCAGATTTTTCAAAACCACTACCTTTCCTTCACTTAATTTCCTCTTATTCCACGCCAATATATCCTTTTATGCCTGATTTCATTGCTCTGTCTTAGCAATTCAGGGAGGCACCCTTCAACTGGATTCTCCCACCGCTCCTCTCATTTGCTTCTCTAACAAAGTTTCTATCGTTTACTCCTCTTGGATTCTCCACACCTAGCTCAACATGCTTCCAGTGTAATGTCATGACTAACTGGAATTTGCCAATGAGTTACAGGGTTGGAATGGGTTGTGGCTTCTCCAATTTCACAGCATGCTGCACGGGAACTGAGCAAGATGGTCCGGCCCCCCAGGCTCTGGTTGATGGTGAAAATGAAGACAATGCTGTTGAGGGCGTTGACTTGCCTAAGTTTCATGAATTCACAATTGAGCAGCTTAGGAGGGCTACGTCTGGATTTGCTGTTGAAAACATAGTTTCTGAGCATGGAGAAAAGGCGCCAAATGTAGTCTATAAAGGGAGACTAGATAATCAGATGCGAATCGCTGTCAAACGGTTCAACAGAAATGCCTGGCCTGAAGCGCAGCCATTTTTGGAGGAGGCCAGGGCTGTTGGTCAGCTAAGGAACCAAAGATTGGTAAATCTGCTTGGGTGCTGTTGCGAAGGCGAAGAGAGGTTACTTGTTGCGGAATATATGCCCAACGATACTTTGGCAAAACATTTATTCCATTGGGAAACTCAGCCCATGAGATGGGCAATGCGAATGAGAGTTGCTCTATGCCTTGCCCAAGCCCTAGAGTACTGCACCAGCAAAGGGCGTGCACTGTATCATGATTTAAATGCTTACAGAGTTCTTTATGATGATGACTACAATCCTAGACTTTCATGCTTTGGTCTGATGAAAAATAGTCGAGATGGGAAAAGTTATAGTACGAATTTGGCTTTTACTCCACCTGAATATCTGAGGACAGGCAGAGTGACCCCAGAGAGTGTAACTTATAGCTTTGGAACCCTTTTGCTTGACCTTCTCAGTGGAAAACATATTCCTCCAAGTCATTTTCTTCTTCCTCTTATACTAGCTAAAATCAAAGTCTTCAACGCTGAGATGCTATCAAGCTCTTGTTTAGAAGGACAATTTACAAATGATCAGGACCCTGTTGGGAACTCTTGCTTAGAAGGAGAGCTTACAAATGATGATGGGACTGAATTAGTGCGTCTAGCTTCACGATGTTTGCAATCTGAACCGCGGGAGCGTCCTAATCCAAAGTCAGTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCATGTGCTGATGGGTATACCAGATGGTACAGCTGCTTTTCCCCTTTCACCTCTTGGAGAAGCTTGTCTACGAATGGATCTGACTGCCCTGCATGAGGTGATGGAGAAGATTGGCTATAAAGACGATGAGGGTGCAGCAACTGAGCTTTCGTTCCAAATGTGGACGAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAAGGGGACGCTGCCTTTCGGCATAAGGATTTTAAAACTGCAATTGATAGCTATTCAGTGTTCATTGATGTTGGCACCATGGTTTCTCCAACAGTTTATGCACGTCGTAGTCTATGTTATCTGATGAGCGATATGGCCGAAGAAGCACTTAATGATGCAATGCAAGCACAAGTAATATCCCCGGTTTGGTACATTGCGTTTTATTTACAAGCTGTTGCTCTTTTAGCACTGGGCAAAGAGAATGATGCTCAAGTGGCACTTAAAGAGGGTTCTTCGCTTGAAACTAAAAAGAGCACAAATTAGTTGAGTTCTTCTTGGCCAAACCTTACTTTCATGTTGCTGAAGATAACTTATATAGAAACGTGCTGGTGTGTCAATGTTACACAGGTTCCAGTTCCTTATCGGGCAAATTGTATTGCATGGAAAAGAGTGGTTTATTATACTTGTGCATGACTGGTTCATTGGTTGCTTAGAAGCATTCTTTTGCACAGACTAGAGTCACCAAAGTTATACGATATCTATTTGCACTAGGGGTTCTCTTTTTGTTGTTTAGTCGGTTATGTTAGTATAAAGGTCGTGGGAAGGATTTGAGATACTTTGGTTTGTAAAGGTTCACTTTGGAGTGTATGTCAGCATTTGTTGGGTAAGCAGCAGATGTTGTTGTTGTGCTTGTAATTTAATGTACAGAACAATTGGTTATGGCTACTGCGTCTACATGAAATAGGTTGTTTTTGTATGTTGTAATGATATATTGATTTTGCATCTAATAAATTCTTTTAATCTTTTCTGTGC 2474 0.4184 MTNWNLPMSYRVGMGCGFSNFTACCTGTEQDGPAPQALVDGENEDNAVEGVDLPKFHEFTIEQLRRATSGFAVENIVSEHGEKAPNVVYKGRLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLVNLLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRALYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHFLLPLILAKIKVFNAEMLSSSCLEGQFTNDQDPVGNSCLEGELTNDDGTELVRLASRCLQSEPRERPNPKSVVAALIPLQKDSEVPSHVLMGIPDGTAAFPLSPLGEACLRMDLTALHEVMEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYSVFIDVGTMVSPTVYARRSLCYLMSDMAEEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVALKEGSSLETKKSTN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01079 523 ProSiteProfiles Protein kinase domain profile. 74 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01079 523 Pfam Protein tyrosine and serine/threonine kinase 87 344 IPR001245 GO:0004672|GO:0006468
Pste3g01079 523 FunFam probable serine/threonine-protein kinase At4g35230 416 523 - -
Pste3g01079 523 Gene3D Transferase(Phosphotransferase) domain 1 151 363 - -
Pste3g01079 523 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Pste3g01079 523 FunFam probable serine/threonine-protein kinase At4g35230 46 149 - -
Pste3g01079 523 SUPERFAMILY TPR-like 422 516 IPR011990 GO:0005515
Pste3g01079 523 Gene3D Tetratricopeptide repeat domain 416 523 IPR011990 GO:0005515
Pste3g01079 523 SUPERFAMILY Protein kinase-like (PK-like) 52 356 IPR011009 -
Pste3g01079 523 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 44 521 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01079 Pste-Chr3 6952002 6962391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01079 59 371 Glycoside Hydrolase AT3G07070 32.099 7.27e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pste3g01079 PK_Tyr_Ser-Thr 2.2e-24 CL0016