Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01076 TTACAAGTCCCACATCGATCAGATCTTGGAAAACAATGTCACCCCTACCATTTTCACTCTCTCTTTCTCTTTTCTTTTTCTTCCTCTTAGCACCATTACTCTTAGCTCAATCTCCACCTTCTCCTACTTCTCCTTCTTCTGCTGCTGCATGCAAAGGCACATTATATCCAAAACTATGCCGTTCCATTCTCTCAGCTATTCGTTCCTCACCTTCTGACCCTTATGGCTATGGAAAATTCTCCATAAAGCAAAGCCTCAAACAGGCAAGGAAACTAGCCAAAGTGTTTGATGATTTTCTCCAAAGACACCAATCATCATCACTTAACCATGCTGAGATTGCATCACTTGGTGACTGCAGAGACCTCAACAAGCTCAATGTGGACTACTTGGTGTCAATCTCTGAGGAGCTCAAGTCAGCAGGCTCATCAGATTCAGAACTTGTTGAGAAGATTGAGAGCTACCTCAGTGCTGTGGCCACCAATCACTACACTTGCTATGATGGGTTGGTTGTCACCAAAAGCAACATTGCCAATGCACTTGCTGTGCCTCTCAAAGGTGCCACACAGTTGTATAGTGTCTCACTTGGCCTTGTCACTCAGGCTCTTGACAAAAACCTTAGAAGGAATAAGACTCGCAAACATGGTCTTCCCACCAAGAACTTCAAGGTTAGGCAACCACTTGAGAAGCTCATCAAGCTTCTTCGCACAAAGTATAGTTGTGCCAAATTAAACAATTGCACTAGAAGTGGAAGGATTCTTAAAGAAAGTGGAAACCAAGGAATTTTATTGTACGACTTTGTGATTGTGAGCCATTATGGAATAGACAACTACACTTCCATTGGAGAGGCTATTGCTGCTGCACCCAACAACACAAAGCCTGAAGATGGATATTTCCTTGTCTATGTTAGGGAGGGAATCTATGAGGAATATGTAGTTATTCCCAAAGAAAAGAAGAATATATTGCTAGTTGGAGATGGTATTAACAAGACTATCATAACAGGGAACCATAGTAATGGAGGCAATTGGACGACTTTTAATTCTTCCACATTTGCTGTTTCTGGAGAAAGATTTATAGCAGTGGATGTTACATTCAGAAACACAGCTGGACCTGAGAATCACCAAGCTGTGGCACTGAGGAGCAATGCTGACCTCTCCACATTCTACCGTTGCAGTTTTGAAGGATATCAAGACACACTCTATGTTCACTCTTTGAGGCAATTCTATAGAGAGTGTGAAATTTATGGCACTGTGGACTTCATTTTTGGCAATGCAGCTGTGGTCTTCCAAAACTGTAAAATGTATGTCAGAAAACCGTTGCCAAACCAGAAGAATGCTGTGACAGCACAAGGAAGAACTGATCCCAATCAAAACACTGGCATTTCAATCCAAAACTGTACCATTGATGCTGCACCTGACTTGGCTTCAGACTTGAATTCCACGTCAAGTTACTTAGGCCGGCCGTGGAAGGTATATTCAAGGACTGTTTACTTGCAATCATATATTGGAAATGTAATTCATCCAGCTGGGTGGTTAGAGTGGAATGGTACAGTTGGGTTAGACACCCTCTTTTATGGTGAGTTCAACAACTATGGACCTGGTTCTAACACCAGTAATAGAGTACAATGGCCTGGTTACTTTCTGTTGAATGCAACTCAAGCTTGGAACTTTACAGTCCTTAATTTTACATTGGGAAATACTTGGCTTCCTGACACAGATATACCTTACACTGAAGGACTACTAAGATAGACAACTGAAAGCTTATATTGAAAAAACGAATTTGATTCATTATTAGTTAGATGTAATATAACTGTATGATTTTCCTTTTAAAGGAATAGATAGCATCCAAAAGGGATCAGAGTCAAGAATGTTATTATGAAAATTAAAGTCTTAATAACAAAATATATAAGTTTGCA 1912 0.4043 MSPLPFSLSLSLFFFFLLAPLLLAQSPPSPTSPSSAAACKGTLYPKLCRSILSAIRSSPSDPYGYGKFSIKQSLKQARKLAKVFDDFLQRHQSSSLNHAEIASLGDCRDLNKLNVDYLVSISEELKSAGSSDSELVEKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKGATQLYSVSLGLVTQALDKNLRRNKTRKHGLPTKNFKVRQPLEKLIKLLRTKYSCAKLNNCTRSGRILKESGNQGILLYDFVIVSHYGIDNYTSIGEAIAAAPNNTKPEDGYFLVYVREGIYEEYVVIPKEKKNILLVGDGINKTIITGNHSNGGNWTTFNSSTFAVSGERFIAVDVTFRNTAGPENHQAVALRSNADLSTFYRCSFEGYQDTLYVHSLRQFYRECEIYGTVDFIFGNAAVVFQNCKMYVRKPLPNQKNAVTAQGRTDPNQNTGISIQNCTIDAAPDLASDLNSTSSYLGRPWKVYSRTVYLQSYIGNVIHPAGWLEWNGTVGLDTLFYGEFNNYGPGSNTSNRVQWPGYFLLNATQAWNFTVLNFTLGNTWLPDTDIPYTEGLLR 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01076 569 Pfam Pectinesterase 255 552 IPR000070 GO:0030599|GO:0042545
Pste3g01076 569 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Pste3g01076 569 FunFam Pectinesterase 251 567 - -
Pste3g01076 569 SUPERFAMILY Pectin lyase-like 254 566 IPR011050 -
Pste3g01076 569 SMART PMEI_2 30 185 IPR006501 GO:0004857
Pste3g01076 569 PANTHER PECTINESTERASE 19 557 - -
Pste3g01076 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 188 IPR035513 -
Pste3g01076 569 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Pste3g01076 569 CDD PMEI-like_3 39 187 - -
Pste3g01076 569 Gene3D - 253 569 IPR012334 -
Pste3g01076 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 189 IPR035513 -
Pste3g01076 569 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01076 Pste-Chr3 6929331 6934454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01076 38 568 Carbohydrate Esterase AT3G10720 61.453 0.0 689