Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01075 ATGTCTTTCTTCAAATCCTATGGCAAAGTTTATGAGCATGAACAAATGGTGTTGGAGGCAAGGAGGAAAACCAGAAAGAGAATCACAATCATAGGGTTGTCCTCAATAGTCCTAGCAGGTGTTGTGTTTGCTGCTGTATTTGGCATTGTTAGCACCACTGGTAACAACTCACAAGGTGTCAATGATGCTCACACTGTGACCAATTCAGTGAAGGCTGTTTGTGATGTCACTTTGTACAAGGACTCATGCTATAGCAGCCTTGGTTCTGTTGTGGACTCAAGGCAGGTTCAGCCTGAGGAGCTGTTCATGTTGTCTATGAAAATAGCATTATCTGAAGTGTCCAAAGCTGTTGAGTATTTCAGTAATGATCATCAGCATGGAGTTTTCAAAGGGTTGAAGGATAGCAGGACTAAGGAGGCTTTGAAAAATTGCAAGGAACTTTTGGGTCTTGCAGTTGACCATCTGAATAGCTCTTTGACCTCAGGGGAAACATTTTCCCTTCTTGAGGTTTTTGAGGATCTTGAAACATGGTTAAGTGCTGCAGGTACATACCAGCACACTTGCATTGAAGGCTTTGAAAATGCAAAAGAAGCAATTAAATCAAATGTAGAAAGCTATCTTAAAAATTCTACGCAGTTCACTAGTAACAGTCTTGCCATCATTACATGGATTAACAGGGCCGCAACCACATTGAACTTGCGTCGCTTGCTAAGTTTACCTTATCAGAATGAAGCACCAGAATGGCTTCATTCAAAAGATAGGAAACTGCTACTAACAGAGGATTTGAGGAAAAAAGCTGACATTGTTGTGGCCAAAGATGGCAGTGGGAAATATAAAAAAATTTCTGATGCACTTAAGCATGTTCCTAATAAGAGTAACAAGAGGATTGTGATCTATGTGAAGAGAGGAGTTTACTATGAAAATGTGAGGGTAGAGAAGACCAAATGGAATGTGATGATGATTGGTGATGGTATGACTTCTACTGTTGTATCTGGCAGCCGTAACTTTGTGGATGGCACACCAACATTTTCAACTGCAACATTAGCTGTATTTGGAAGGAGTTTCATAGCTAGAGATATGGGTTTTCGAAACACAGCTGGTCCACAGAAGCATCAAGCAGTGGCATTGATGACAAGTGCTGATCAAGCAGTTTACTATAGGTGTCACATTGCTGCATATCAAGACACTCTCTATGCTCATTCCAACCGCCAATTCTATAGAGAATGCAACATCTATGGCACTGTTGATTTCATTTTTGGAAATTCTGCAGTGGTCATCCAAAACTGCAACATTAAGCCAAAGCTACCTATGCATGGCCAGAAGAACACAATCACAGCTCAGGGAAAATTTGACCCTCACATGAACACTGGAATCTCCATTCAATATTGCAACATTTCACCCTTTGGAAACTTGAGTTCTGTTCAGACATACCTTGGAAGACCCTGGAAGAATCACTCAACCACAGTGTACATGAGATCTAGAATTGAAGGTTTTGTGAACCCCAAAGGATGGTTACCATGGACAGGAAACTCAGCTCCAGACACCATTTTCTTTGCAGAATTTGAGAATGTTGGACCAGGTGCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAGAACCATTACCAGTAAACAAGCCAAAAAGTTTACTATCAAGGCTTTTCTACAAGGAGATAAATGGATTTCCACATCAGGTGCTCCATTTAAGTCTGATCTGTGA 1722 0.4094 MSFFKSYGKVYEHEQMVLEARRKTRKRITIIGLSSIVLAGVVFAAVFGIVSTTGNNSQGVNDAHTVTNSVKAVCDVTLYKDSCYSSLGSVVDSRQVQPEELFMLSMKIALSEVSKAVEYFSNDHQHGVFKGLKDSRTKEALKNCKELLGLAVDHLNSSLTSGETFSLLEVFEDLETWLSAAGTYQHTCIEGFENAKEAIKSNVESYLKNSTQFTSNSLAIITWINRAATTLNLRRLLSLPYQNEAPEWLHSKDRKLLLTEDLRKKADIVVAKDGSGKYKKISDALKHVPNKSNKRIVIYVKRGVYYENVRVEKTKWNVMMIGDGMTSTVVSGSRNFVDGTPTFSTATLAVFGRSFIARDMGFRNTAGPQKHQAVALMTSADQAVYYRCHIAAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIKPKLPMHGQKNTITAQGKFDPHMNTGISIQYCNISPFGNLSSVQTYLGRPWKNHSTTVYMRSRIEGFVNPKGWLPWTGNSAPDTIFFAEFENVGPGASTKNRVKWKGLRTITSKQAKKFTIKAFLQGDKWISTSGAPFKSDL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01075 573 NCBIfam pectinesterase inhibitor domain 41 224 IPR006501 GO:0004857
Pste3g01075 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 225 IPR035513 -
Pste3g01075 573 SUPERFAMILY Pectin lyase-like 265 570 IPR011050 -
Pste3g01075 573 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Pste3g01075 573 PANTHER PECTINESTERASE 39 563 - -
Pste3g01075 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 224 IPR035513 -
Pste3g01075 573 FunFam Pectinesterase 66 225 - -
Pste3g01075 573 CDD PMEI-like_3 72 226 - -
Pste3g01075 573 SMART PMEI_2 65 220 IPR006501 GO:0004857
Pste3g01075 573 Pfam Pectinesterase 267 559 IPR000070 GO:0030599|GO:0042545
Pste3g01075 573 FunFam Pectinesterase 261 573 - -
Pste3g01075 573 Coils Coil 189 209 - -
Pste3g01075 573 Pfam Plant invertase/pectin methylesterase inhibitor 69 220 IPR006501 GO:0004857
Pste3g01075 573 Gene3D - 262 573 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01075 Pste-Chr3 6925961 6928898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01075 7 573 Carbohydrate Esterase AT3G10710 56.042 0.0 661