Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01044 ATGATGACTACAGAAACTCAGAGGGTAGTGGTGATCCAGGATGCACCAAGAGATGCTAGTTCAAAGGCAATCCTAAAGGCCCTGAAAAAGTTTTCTGTTAAGGCTGGAGATCATCTTATAATTGTTGCTATCCTTGATTGGATTAGCAGTCCCACTTCTTGGGGTGCCAATAGTAGTATTGGATTCCAATTAGAAGTGCTTACAGGCCCTGCTGCAGAGATTGCTTCTAATGTTGCCACGGAATTTCAGGCAACAAGGTTGATACTAGTTAGACAAATTCACAAAGATATGAAGCATTTCATGCACAAGCTCCCTTGTGGTATGTATAGGATAACAAGCGACAATTCAATTGAGAAGTTGAAAGATCCAAAATCAAGAACCAGTACCAAATCACTTGCTGATAGGGAAGAAAATATATGCTATAAAGAAATGTTACCAGGAAGTGAAGAGGAAGAGCGATCTCTTCCGATGTCCAGGTCTTGTTCATCAAGTGATCTGTTGACATCAACTGGAGTTTCAAGTCAGTGGAGTACAGAAATCTCCACTTCTAGTCTTGGAAGCTTGCAGTATAGCCATCAATACCAAGAGGGAAAGCTTTATTCAAATATACAAAAAGAAACAACAGGGAAACAGTCACTATTTCACATTTCTGAGAATGGAGATCTGAGCCAAATAGAACTGGGAGACTTTGGATTAGCAAGGAATCAAAATCTAGACTCAATACACTCGACGGAAGTTGTTGGAACCTTGGGGTATTTGGCACCAGAATATGCAGAACACGGCAAAGTGTCCACCAAAACAGATGTATATTCTTTTGGGGTGGTTCTACTACAACTAATTACAGGAATGAAGCCTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGCTGGGCAAGGCCACTTTTAAGAGAGAGAAACTATCCAGATTTAATTGATGAAAGGATCATTGACTCTCATGATGTCCATCAACTATTTTGGATGGTTCGAATAGCAGAGAAATGTCTAAGCAGGGAGCCTCAAAGGAGATTAAATATGGTTCAGATTGTTGATGCTCTGACTGACATAGTGGAAGGAAGAACATGTGACATCATATTAAGGGATTACTCTCCTGCAAGGTCAGATTCAATCTATAGTGCATCAGACTCTGCTGATGAATCTGAAGATGAAATGCAGGGATCCTTCAGGTTTGAAGACGATCTACCAAATCACAGTTCAGAAACCACAGAAAGTACTAGCATAAGTCAGATGATTGTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCTCTTCAAGTAGCTCTAGCTCATGTAAGCATCATGATGAGTCCACTAGTGATGTTCAAGAACAGAATGAAGGGGAAATAGAAATATCAAAATCTAATGAGGAGCTACTCAATTCATAG 1407 0.4037 MMTTETQRVVVIQDAPRDASSKAILKALKKFSVKAGDHLIIVAILDWISSPTSWGANSSIGFQLEVLTGPAAEIASNVATEFQATRLILVRQIHKDMKHFMHKLPCGMYRITSDNSIEKLKDPKSRTSTKSLADREENICYKEMLPGSEEEERSLPMSRSCSSSDLLTSTGVSSQWSTEISTSSLGSLQYSHQYQEGKLYSNIQKETTGKQSLFHISENGDLSQIELGDFGLARNQNLDSIHSTEVVGTLGYLAPEYAEHGKVSTKTDVYSFGVVLLQLITGMKPTDKRLGGRSLVGWARPLLRERNYPDLIDERIIDSHDVHQLFWMVRIAEKCLSREPQRRLNMVQIVDALTDIVEGRTCDIILRDYSPARSDSIYSASDSADESEDEMQGSFRFEDDLPNHSSETTESTSISQMIVRQPPSPPIQSISSSSSSSCKHHDESTSDVQEQNEGEIEISKSNEELLNS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01044 468 MobiDBLite consensus disorder prediction 376 468 - -
Pste3g01044 468 MobiDBLite consensus disorder prediction 389 405 - -
Pste3g01044 468 PANTHER OS01G0253100 PROTEIN 226 357 - -
Pste3g01044 468 Pfam Protein kinase domain 219 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01044 468 SUPERFAMILY Protein kinase-like (PK-like) 223 375 IPR011009 -
Pste3g01044 468 MobiDBLite consensus disorder prediction 406 439 - -
Pste3g01044 468 SMART serkin_6 82 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01044 468 Gene3D Transferase(Phosphotransferase) domain 1 177 366 - -
Pste3g01044 468 MobiDBLite consensus disorder prediction 143 162 - -
Pste3g01044 468 MobiDBLite consensus disorder prediction 440 460 - -
Pste3g01044 468 ProSiteProfiles Protein kinase domain profile. 1 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01044 Pste-Chr3 6720976 6728049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01044 221 399 Trihelix Transcription Factor Family AT1G70460 40.741 4.32e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste3g01044 Pkinase 2.2e-14 CL0016