Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01039 CGGGTCTTCATGCAAATTTAACACTAACATAGTTTACTGTAGCTTCGGCTCATGTTGGTTTTCTTGTGTGAACCAAAAAGGTGGGAGGCACACTCACATTCTTGTACTTGAAGTTTTTCTTTTGTGGTTAAGGATAAAGTGGTGTTTCTCTTCTATCTTGCCACCCCAGAACTTTTTTTCTGTTGATTGTGATTTATGTTGCAGTTACTCCCTCTTGGGTTGGAAAAGGAGTTCTTAAAAGAATTGTTGGTGAAATCTGTGGAGGGTTTGTGTTAGCTGATTGAGCAAAAGATGGGGTTTGAACTATTGAATTGGTATTGCCAGCCAGCAGAAAACAGCATTTGGACTCAAGTAGTGGATAGTGCTTTTGGGTCCTATACACCTTGTGCAATTAACACTCTTGTTATCTCCATTTCCAATTTGGTTCTTATAGGCTTGTGCTTATATCGGATATGGCTTATCACTTGCAATGCTAAAGCTCAGAGGTTTTGTTTGAGTTCAAATTACTATAATTATCTTCTGGGAATGTTGGCTGCTTATTGTGCTGCTCAACCTTTGTTGAGATTGCTAACTGGAAATTCAGCTTTCAACCTGAATGAGGAAACCAGCTTTGCTCCTTTTGAGATAACAGCTCTGATAGTTGAAGCACTTACTTGGAGCTCAATGATAACTCTCATCGTCTTGGAAACCAAGGTTTATATCAGACAATTTAGATGGTTGGTGCGCTTTGGAGTTATATATGTTTTGGTGGCAGATATTGTAATGCTCAACCTTCTTCTGTCAGTGAAACATTACTGCAGCAGATCTGCTCTGTTTCTGTACATCAGCAGTGTCATCTGTCAGGTGTTGTTTGGTACCTTACTTCTTGTTTACATTCCTAATTTGGTTCCTTATTCTGGCCATATAACAACACAAGCTGAGCTACCTGACCATGGCGAATACGAACCTGTTTGTGGAGAAGATAAAGTTTGCCCTGAGAGGCATGCTAATATATTCTCTAGAATATGTTTTGGATGGATAACTCCACTCATGAAACAAGGCTACAGAAAACCCATAATTGAAAAGGATGTTTGGAAGCTAGACAAATGGGATCAAACAGAGACCTTGACTGAAAAGTTCCAAAAGTGTTGGATGTTAGAATTTCAAAGCTCTAATCCATGGCTTTTAAGAGCATTGAACAATAGTCTAGGGAAAAGGTTTTGGATGGGAGGCATCTTTAAGATTGGTAATGATCTTTCTCAGTTTGTGGGACCTATTTTGTTGAATCATCTCTTAGATTCAATGCAAAGAGGAGATCCAACTTGGATTGGTTACATCTATGCCTTCTCTATATTTGTTGGAGTGACTGCTGGTGTTCTTTGTGAAGCACAGTATTTCCAGAATGTTATGCGTGTTGGTTTTCGGCTTCGATCAACTTTGGTGGCTGCTATATTTAGAAAGTCTTTAAGGCTAACTAACGATGGTCGAAAGAAATTTGCATCTGGGAAGCTTATGAATATGATAACAACAGATGCTAATGCATTGCAGCAAATATGTCAACAACTTCATGGACTATGGTCAGCACCATTCCGTATCACTGTAGCTATGGTTCTCCTATACCAACAGCTAGGTGTTGCCTCACTTACTGGATCATTAATGCTAGTTCTTATTATCCCACTGCAGGCAAGTTTTACATTAGTGATTAGCAAAATGCGAAAACTGACAAAAGAAGGACTTCAACAGACAGACAAAAGGGTGGGTCTCATGAATGAAATTCTGGCTGCCATGGATACTGTAAAATGTTATGCATGGGAGACAAGCTTTCAATCTAGAATTTTAAGCATACGAGATAACGAACTATCATGGTTCCGCAAAGCCCAGCTGCTATATGCTCTTAACACTTTTATACTAAACAGCATCCCTGTTCTTGTGACGGTTGCCTCTTTTGGAATGTTTACTTTACTGGGTGGAGAATTGACACCTGCAAGGGCATTTACCTCATTATCTCTGTTTGCAGTTTTGCGCTTTCCTTTAAATATGCTACCAAACTTACTAAGTCAGGTAGCAAATGCAAATGTCTCATTGCAACGTTTGGAGGAACTGTTCTTAGCTGAGGAGAGAAATTTGAAAGAAAATCCACCGATTGAACCAGGACTTCCAGCCATCTCAATTGAGAATGGATATTTTTCCTGGGATCCTAAGGAAGAGAAGCCTACATTATCAGATATCAATGTGGAAATTCCAGTTGGCAGCTTAGTTGCAATCATTGGTGGTACTGGGGAAGGAAAAACGTCACTTATTTCAGCAATGATTGGAGAGTTACCTCCTTTAGCTGATGGAAATGCTACAATTAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACCGTTCGCGAAAATATATTATTTGGAAAAAAATTTGAGTATGAACGTTATCTGAAGGTCATCGACGTCACTGCTTTACAGCATGATATCAACTTACTACCTGGACGTGATTTTACTGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGGGTTTCCTTGGCTAGAGCTGTATACTCAAATTCGGATGTATATATGTTTGATGATCCTTTGAGTGCTCTTGATGCTCATATTGGTCAAGAGGTTTTCAGGAACTGTATAAAGGAAGGACTGCGAGGAAAAACCAGGGTTCTTGTCACCAACCAGCTACATTTTCTCCCTCAGGTGGATAAAATCATTTTGGTTAGTGAAGGCATGATTAAGGAGCAGGGAACCTTTGAGGAGTTATCAAAAAGTGGGCCTCTATTTCAGAAACTAATGGAAAATGCAGGCAAAATGGAACAAGCAGATCATAATGAAGATAAAGAAAGACATGATAAGGCTAATGATTTATCCTCAAATAATGAAGAAATTGTGGAGTTACCAAGTGATGCAAGCTATGAGAAGAAAGGAAAATTACGAAAGTCAGTACTTATTAAGAAAGAAGAGCGTGAGACAGGTGTGGTTAGTTGGAAAGTTATAATGCGGTACAAGACTGCACTGGGAGGACTGTGGGTAGTTTCCATACTCTTTGCTTGCTATACATTAACAGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTGTGGACATCTCAAGATTCCACTGAAGATTATGATCCGGGATATTTTCTTTTGATCTATGCACTTTTCTCATTTGGACAGGTATCTGTGGCACTTGCAAACTCTTATTGGTTGATCATTTCAAGTCTTCGCGCTGCCAAGAATTTGCACGATTCAATGCTTGATAAAATCCTCCGGGCTCCTATGTTATTCTTCCAAACTAATCCTGTTGGCCGCATAATTAATAGGTTTGCAAAAGATATGGGAGATATAGATACCAATGTTTTCAATTTGGTAAACATGTTTTTGGGGCAAGTCTGGCAACTACTTTCAACATTTGTTCTTATAGGCACTGTGAGCACAATATCCCTCTGGGCTATAATGCCACTTCTGATATTCTTTTATGCAGCTTATATATATTACCAGAGCACGGCTCGAGAGGTGAAGCGCATGGATTCCATAACAAGATCTCCTGTTTATGCACATTTTGGAGAATCGCTGAATGGTTTGTCAAGCATCCGTGCTTATAAAGCATATGACAGAATGGCGCAGATTAATGGAAAATTCATGGATAACAACATCAGATTTACCCTTGTGAATATAAGTTCAAATCGTTGGCTCACCATAAGGCTAGAAACATTAGGAGGCCTAATGATTTGGTTGATAGCAACCTCTGCTGTCTTGCAGAATGCAAGAGCTGCAAACCAGGCAATGTTTGCATCTACAATGGGTTTACTTCTCAGTTATACTTTGAACATAACAAATCTCTTGAGTGGTGTCCTCAGACAAGCAAGTAGAGCTGAAAACAGTTTAAACTCTGTTGAGCGTGTCGACACATATATAAATTTAGAAACTGAGGCTCCAGGTATAATTGATACAAACCGTCCACCACCAGGATGGCCAACATCAGGATCAATTGAGTTTGAGGATGTTGTTCTGAGATACCGGCCTGAACTTCCTCCAGTGCTGCATGGGTTGTCTTTTACAGTACCTCCAACAGAGAAGATAGGGGTCGTAGGAAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCATTATTCCGGATTGTAGAACTACAGAAAGGAAGAATCATTATTGATGGTTGTGATATTTCTACATTTGGACTTGCAGATCTTCGAAAAGTTCTTACTATCATACCACAATCTCCAGTTCTTTTCTCTGGAACTGTTTGTTTCAATCTTGATCCATTTAATGAACACAATGATGCTGACCTGTGGCAAGCTTTAGAGAGGGCGCATTTGAAGGATGTAATAAGAAGAAATCCATTTGGTCTAGATGCTCAGGTTTCAGAGGGAGGAGACAATTTCAGTGTTGGACAGAGGCAACTGTTAAGTCTAGCTAGAGCACTGCTACGAAGATCAAAGGTTCTTGTCCTGGATGAAGCCACTGCTGCTGTAGATGTTCTTGAATACAGCTCACCAGAGGAACTCTTGCAAAATGAAGGAACTGCTTTCTACAAGATGGTTCAAAGTACTGGACCAGCAAATGCTCAGTATTTACGTAGCCTAGTATTTGGAAGGACAGAGAACAACTCTAATGAAAATAGCAAGGGGATAGAAAACCATATGAGACAATTAGCTTCTACTCACTGGACTGCTGCAACCCAGTTTGCCATAGCTGCCACCCTTTCTTCATTACACCAGAACCTTCAAAAGTCAAGTAGTGAAGACCATAAAGATATACTTGATAAAACAAAGGATGCAGTTACAACCCTTCAAGAAGTTCTAGTGGGGAAGCAAGATGAAGCAATAGAAGAGGCACTGCATAAACACTATATTCCTACAGATACATGGTGGTCTACCCTCCATAAAGTTATTGAAGGTCTTGCTGTCTTAACGAGGTTGCCTCTAGACAACATTCAACAACTAGAACTTGATTTTGAAGGGAGATCTTTTGACTACTAACATATCTTGAGGTGTAGAGAGGAGTTTACAATTAAATCTCAGAGGGATATATAGTCACAGTAACATGATTCTTTAGAATGTTC 5105 0.3961 MGFELLNWYCQPAENSIWTQVVDSAFGSYTPCAINTLVISISNLVLIGLCLYRIWLITCNAKAQRFCLSSNYYNYLLGMLAAYCAAQPLLRLLTGNSAFNLNEETSFAPFEITALIVEALTWSSMITLIVLETKVYIRQFRWLVRFGVIYVLVADIVMLNLLLSVKHYCSRSALFLYISSVICQVLFGTLLLVYIPNLVPYSGHITTQAELPDHGEYEPVCGEDKVCPERHANIFSRICFGWITPLMKQGYRKPIIEKDVWKLDKWDQTETLTEKFQKCWMLEFQSSNPWLLRALNNSLGKRFWMGGIFKIGNDLSQFVGPILLNHLLDSMQRGDPTWIGYIYAFSIFVGVTAGVLCEAQYFQNVMRVGFRLRSTLVAAIFRKSLRLTNDGRKKFASGKLMNMITTDANALQQICQQLHGLWSAPFRITVAMVLLYQQLGVASLTGSLMLVLIIPLQASFTLVISKMRKLTKEGLQQTDKRVGLMNEILAAMDTVKCYAWETSFQSRILSIRDNELSWFRKAQLLYALNTFILNSIPVLVTVASFGMFTLLGGELTPARAFTSLSLFAVLRFPLNMLPNLLSQVANANVSLQRLEELFLAEERNLKENPPIEPGLPAISIENGYFSWDPKEEKPTLSDINVEIPVGSLVAIIGGTGEGKTSLISAMIGELPPLADGNATIRGTVAYVPQISWIYNATVRENILFGKKFEYERYLKVIDVTALQHDINLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYMFDDPLSALDAHIGQEVFRNCIKEGLRGKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELSKSGPLFQKLMENAGKMEQADHNEDKERHDKANDLSSNNEEIVELPSDASYEKKGKLRKSVLIKKEERETGVVSWKVIMRYKTALGGLWVVSILFACYTLTEVLRISSSTWLSVWTSQDSTEDYDPGYFLLIYALFSFGQVSVALANSYWLIISSLRAAKNLHDSMLDKILRAPMLFFQTNPVGRIINRFAKDMGDIDTNVFNLVNMFLGQVWQLLSTFVLIGTVSTISLWAIMPLLIFFYAAYIYYQSTAREVKRMDSITRSPVYAHFGESLNGLSSIRAYKAYDRMAQINGKFMDNNIRFTLVNISSNRWLTIRLETLGGLMIWLIATSAVLQNARAANQAMFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNSVERVDTYINLETEAPGIIDTNRPPPGWPTSGSIEFEDVVLRYRPELPPVLHGLSFTVPPTEKIGVVGRTGAGKSSMLNALFRIVELQKGRIIIDGCDISTFGLADLRKVLTIIPQSPVLFSGTVCFNLDPFNEHNDADLWQALERAHLKDVIRRNPFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVLEYSSPEELLQNEGTAFYKMVQSTGPANAQYLRSLVFGRTENNSNENSKGIENHMRQLASTHWTAATQFAIAATLSSLHQNLQKSSSEDHKDILDKTKDAVTTLQEVLVGKQDEAIEEALHKHYIPTDTWWSTLHKVIEGLAVLTRLPLDNIQQLELDFEGRSFDY 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01039 1576 FunFam ABC transporter C family member 2 612 858 - -
Pste3g01039 1576 CDD ABCC_MRP_domain1 618 818 - -
Pste3g01039 1576 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1241 1478 IPR003439 GO:0005524
Pste3g01039 1576 SMART AAA_5 1267 1507 IPR003593 GO:0016887
Pste3g01039 1576 SMART AAA_5 645 825 IPR003593 GO:0016887
Pste3g01039 1576 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 586 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g01039 1576 Coils Coil 577 597 - -
Pste3g01039 1576 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 842 IPR003439 GO:0005524
Pste3g01039 1576 Pfam ABC transporter 636 771 IPR003439 GO:0005524
Pste3g01039 1576 Gene3D - 600 868 IPR027417 -
Pste3g01039 1576 Pfam ABC transporter 1258 1406 IPR003439 GO:0005524
Pste3g01039 1576 Gene3D ABC transporter type 1, transmembrane domain 284 599 IPR036640 GO:0005524|GO:0016020
Pste3g01039 1576 Gene3D ABC transporter type 1, transmembrane domain 882 1222 IPR036640 GO:0005524|GO:0016020
Pste3g01039 1576 Gene3D - 1225 1429 IPR027417 -
Pste3g01039 1576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 841 IPR027417 -
Pste3g01039 1576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1231 1411 IPR027417 -
Pste3g01039 1576 FunFam Multidrug resistance-associated protein member 4 1225 1410 - -
Pste3g01039 1576 SUPERFAMILY ABC transporter transmembrane region 289 594 IPR036640 GO:0005524|GO:0016020
Pste3g01039 1576 CDD ABC_6TM_ABCC_D2 920 1216 IPR044726 GO:0140359
Pste3g01039 1576 ProSitePatterns ABC transporters family signature. 744 758 IPR017871 GO:0005524|GO:0016887
Pste3g01039 1576 CDD ABC_6TM_ABCC_D1 306 594 IPR044746 GO:0140359
Pste3g01039 1576 CDD ABCC_MRP_domain2 1239 1410 - -
Pste3g01039 1576 FunFam ABC transporter C family member 2 884 1222 - -
Pste3g01039 1576 ProSitePatterns ABC transporters family signature. 1378 1392 IPR017871 GO:0005524|GO:0016887
Pste3g01039 1576 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1204 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g01039 1576 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1489 - -
Pste3g01039 1576 MobiDBLite consensus disorder prediction 846 865 - -
Pste3g01039 1576 Pfam ABC transporter transmembrane region 304 574 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g01039 1576 Pfam ABC transporter transmembrane region 922 1168 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g01039 1576 SUPERFAMILY ABC transporter transmembrane region 905 1221 IPR036640 GO:0005524|GO:0016020
Pste3g01039 1576 FunFam ABC transporter C family member 2 279 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01039 Pste-Chr3 6675996 6690791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01039 625 834 Calmodulin-binding Proteins AT2G36910 30.045 1.53e-23 107