Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01030 CACTCTTCCACCTCCACCACATACCAAACCAATCTCAACAATGTGATCTCTCACTTCTCATCTGATTCTGCCACCAGCAATGGTTATGGTCACACAACTTCAGGTGCTGACCAAAACAAAGTTTATGGTCTCTACGTTTGCCGTGGTGATGTGAACACACCCCTGTGCCATTCCTGTGTCCAAAACAGCACCAAATTGCTCAAGCAACACTGCCCCAATAGCATTTCAGCTGTTATATGGTTCCCCTATTGTGCCTTTAGGTTCTCAAACCACAGTTTCTTAGGTAAACTTTCACTGAGGCCAAGGATTCCAATGTTTGATCCATCAGACAATGTTACAATAGGTGGAAGATTTGATGGTGATTTCATGGTTATGATGAATAGTTTGATAGAAAAGGCTTCAGAGGGACCCTTTAAGTTTTCGACTCATATGTTCCTCAAAAAGGGCACTCCAACAAGGTTTGGATGGATGCAGTGTACAAGAGACATCACAAGTGGGGAATGCAGAACATGTTTGAGCAACATGCTTGAGGAGGTTAACAATTGCTGTGTGGACAAAACAGTGTGGCGTATCTTTTCTCCAAGTTGTATTGTTATGTATGAAACTCAACCATTCTTTTTGAATGAGACAGTGCCTGCTGCTGCACAAGCACCTCAACAAGGTCCAACTGATAAGGAAGAGACAATGAATTCTGACCTTCCTATGATGCCTCTGAATACAATTCTAACAATTACTGATAATTTTTCTGATGAATATAAGTTAGGGACAGGTGGATTTGGGTCTGTCTACAAGGGTGTTTTACCAGATGGAAAACAAATTGCAGTGAAAAGGCTTTCAAAAACTTCAATTCAAGGTATAAAAGAATTCAAGAATGAAGTGAAGTTGATTGCAAAATTGCAACATAAGAACCTTGTGAGACTATTGGCTTTTTGCATTGAGAAAAATGAAAAGATGCTTATTTATGAATACATGCCCAATTCCAGCCTCGACTTCCACCTATTTGATATGGATAAGGGTGCAAAGTTGGATTGGAAACATCGATCAAACATTATTAATGGCATTGCTAAAGGGCTTTTATACCTTCATGAGGATTCTAGACTCAAGATTATTCATAGAGACTTAAAAACTGGTAATATTCTATTAGATCATGAAATGAATCCTAAAATATCTGACTTTGGATTAGCAAGAATATTTGGAGAGTATGCCATGGATGGCTTGTTTTCAGTGAAATCAGATGTTTTCAGCTTTGGTGTTCTTCTGCTAGAGATCATAAGTGGAAAAAGGATCAGTGAATTCAATCTTTTTTACCATGGCCAAAGTCTTCTCATACGTGCATGGAACTTGTGGTGTGAAGGTAAAGGTTTGGAATTGATGGACCCGTTAATAGAAAATTCATGTGTACGTGGTGAAGTTAAGAGCTGCATGCACATTGGACTGTTGTGTGTGCAAGAAGATGCAGCAGATAGACCAACAATGTCAAGTATTGTTAACATGCTTGCAAGTGACAATGTGACTCTTCCAAGCCCTACACGTCCTGCATTTTCTGTTGGAAGAGTTGTCATTGAACGAGAGTCATCATCAAATAATTGGGCACATTCTATCAATGAATTAACTCTCTCAGATATAACACCT 1632 0.3915 HSSTSTTYQTNLNNVISHFSSDSATSNGYGHTTSGADQNKVYGLYVCRGDVNTPLCHSCVQNSTKLLKQHCPNSISAVIWFPYCAFRFSNHSFLGKLSLRPRIPMFDPSDNVTIGGRFDGDFMVMMNSLIEKASEGPFKFSTHMFLKKGTPTRFGWMQCTRDITSGECRTCLSNMLEEVNNCCVDKTVWRIFSPSCIVMYETQPFFLNETVPAAAQAPQQGPTDKEETMNSDLPMMPLNTILTITDNFSDEYKLGTGGFGSVYKGVLPDGKQIAVKRLSKTSIQGIKEFKNEVKLIAKLQHKNLVRLLAFCIEKNEKMLIYEYMPNSSLDFHLFDMDKGAKLDWKHRSNIINGIAKGLLYLHEDSRLKIIHRDLKTGNILLDHEMNPKISDFGLARIFGEYAMDGLFSVKSDVFSFGVLLLEIISGKRISEFNLFYHGQSLLIRAWNLWCEGKGLELMDPLIENSCVRGEVKSCMHIGLLCVQEDAADRPTMSSIVNMLASDNVTLPSPTRPAFSVGRVVIERESSSNNWAHSINELTLSDITP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01030 544 ProSiteProfiles Gnk2-homologous domain profile. 1 93 IPR002902 -
Pste3g01030 544 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 527 - -
Pste3g01030 544 FunFam Cysteine-rich receptor-like protein kinase 28 1 92 - -
Pste3g01030 544 ProSiteProfiles Gnk2-homologous domain profile. 99 205 IPR002902 -
Pste3g01030 544 Gene3D Phosphorylase Kinase; domain 1 211 323 - -
Pste3g01030 544 Pfam Salt stress response/antifungal 115 202 IPR002902 -
Pste3g01030 544 Pfam Salt stress response/antifungal 4 90 IPR002902 -
Pste3g01030 544 SUPERFAMILY Protein kinase-like (PK-like) 232 519 IPR011009 -
Pste3g01030 544 FunFam Os07g0541700 protein 324 406 - -
Pste3g01030 544 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 213 323 - -
Pste3g01030 544 Gene3D - 105 205 IPR038408 -
Pste3g01030 544 Gene3D - 1 93 IPR038408 -
Pste3g01030 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Pste3g01030 544 Gene3D Transferase(Phosphotransferase) domain 1 324 506 - -
Pste3g01030 544 SMART serkin_6 248 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01030 544 Pfam Domain of unknown function (DUF3403) 501 542 IPR021820 GO:0004674
Pste3g01030 544 Pfam Protein kinase domain 249 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01030 544 ProSitePatterns Protein kinases ATP-binding region signature. 254 276 IPR017441 GO:0005524
Pste3g01030 544 ProSiteProfiles Protein kinase domain profile. 248 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01030 544 CDD STKc_IRAK 254 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01030 Pste-Chr3 6560075 6567228 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01030 3 516 Receptor kinase-like Gene Family AT4G23230 39.765 1.49e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste3g01030 PK_Tyr_Ser-Thr 6.7e-37 CL0016