Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01027 ATGCCATATTTTGTGTTTAATCAAACACATGAACAAAGAACCATAAAAATGCTCTACCAATGGTTGTTCACTATCAAATTCATATCCCTTCTTTCTTTTGCTGCTGGTAACAACAGTAGCAACATACCACCACTTGATTATAGATACCAATGTTTAAACCAATCTTCTGTTCCTCTCTCCATCACATACCAAATCAACCTCAAAGATTTGTTCACTTATCTCTCTGATTCTGCTAGCACCAATAGTTTTGGCCACATAAACTTAGATGATGATCATCAAAACATGGTTTATGGACTCTACCTTTGCCGTGGTGATGTGAACAACACCCTTTGCAACTCATGTGTCCAAAACTCCACCACATTGCTGAATCAACACTGCCCCAATAGTACCTCAGCTATTATGTGGCTCCCCTTTTGTGTTGTTAGGTACTCAAACCAGAAATTCTTTGGCAAACTCACCATAAAGCCAAGGGTTCCAATGTTTGATGCAACACAAAATTTTTCTGGAGAATTTGATAGTGATGCTAGGATTTTGATGAATGGTTTGATACAAAAGGGGTCAGAGGCACCCTTAATGTTTGGGACACATGTGTGCAACATAAATGGCACTCAAACAAGGCATGCATTGGTGCAGTGCAGCAGAGATATTACAAGAGAGGAATGCAGAACATGTTTGAGGAATATGGTTGAGGAGGTTCAAAATTGCTGCATGGAGAAGAAGGTGTGGCATGTCTTTTCTCCAAGTTGTGTTGTCATGTATCAAACTCAGCCATTCTTTTTTATTGACACACTGCCTCAACAAGTCTTTATTCTTATAAAAATTATTTTACTATTTCAGGGTGTTTTACGGGATGGAAGGCAAATTGCTGTTAAAAGACTTTCAAAAACATCAATTCAAGGTGTCAAAGAATTTAAAAATGAAGTAATGTTGATTGCAAAATTACAACATCGAAACCTTGTGAAACTGTTGGCCTTTTGCATTGAGAGAGATGAAAAGCTACTTATTTATGAATACATGCCTAATTCTAGCCTTGACTTCCACCTATTTGGAATGCAGAAGAGAATGAGGTTGAATTGGAAGCAACTATCAAATATTATTAATGGTGTTGCTAAAGGGCTTTTATACCTTCATGAAGATTCTAGACTTAGGATAATCCATAGAGACTTAAAGGCGGGCAATATTTTATTAGATCATGAAATGAATCCTAAAATATCAGACTTTGGATTAGCAAGAATATTTGAAGGTGATAAGAGGGAAGCAAATACAAATAGAGTTGTGGGAACTTATGGATATATGGCTCCAGAATATGCCATGGAAGGTGTGTTTTCGGTGAAGTCAGATGTTTTTAGCTTTGGTACTCTTTTGCTAGAGATCATCAGTGGAAAAAGGATAAGTGAATTCAATCTTTCTGACCATGGTCAAAGCCTTCTCATATATGCATGGAACCTTTGGTGTGAAGGCAGAGGTTTGGAATTAATGGATCCATTAATAGAAAAGTCTTGTGTAAATAGTCAAGTTCTAAAGTGCATACAAATTGGACTATTGTGTGTACAAGAAGATGCTATAGACAGACCAACAATGTCAGGTGTTGTTTATATGCTTTCAAGTGATAAAGTGATTCTCCCAAATCCCAAACGCCCTGCATTTTCTGTTGGAAGGAATTTCCTTGAACGAGGGTCATCTTCAGACAATTGGACAAATTCAATCAATAAATTAACCCTCTCAGAAGTAACACCTAGGTGA 1743 0.3712 MPYFVFNQTHEQRTIKMLYQWLFTIKFISLLSFAAGNNSSNIPPLDYRYQCLNQSSVPLSITYQINLKDLFTYLSDSASTNSFGHINLDDDHQNMVYGLYLCRGDVNNTLCNSCVQNSTTLLNQHCPNSTSAIMWLPFCVVRYSNQKFFGKLTIKPRVPMFDATQNFSGEFDSDARILMNGLIQKGSEAPLMFGTHVCNINGTQTRHALVQCSRDITREECRTCLRNMVEEVQNCCMEKKVWHVFSPSCVVMYQTQPFFFIDTLPQQVFILIKIILLFQGVLRDGRQIAVKRLSKTSIQGVKEFKNEVMLIAKLQHRNLVKLLAFCIERDEKLLIYEYMPNSSLDFHLFGMQKRMRLNWKQLSNIINGVAKGLLYLHEDSRLRIIHRDLKAGNILLDHEMNPKISDFGLARIFEGDKREANTNRVVGTYGYMAPEYAMEGVFSVKSDVFSFGTLLLEIISGKRISEFNLSDHGQSLLIYAWNLWCEGRGLELMDPLIEKSCVNSQVLKCIQIGLLCVQEDAIDRPTMSGVVYMLSSDKVILPNPKRPAFSVGRNFLERGSSSDNWTNSINKLTLSEVTPR 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01027 580 Pfam Salt stress response/antifungal 168 255 IPR002902 -
Pste3g01027 580 Pfam Salt stress response/antifungal 58 146 IPR002902 -
Pste3g01027 580 Gene3D Phosphorylase Kinase; domain 1 271 338 - -
Pste3g01027 580 CDD STKc_IRAK 280 534 - -
Pste3g01027 580 Gene3D Transferase(Phosphotransferase) domain 1 339 541 - -
Pste3g01027 580 Pfam Protein kinase domain 283 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01027 580 FunFam Cysteine-rich receptor-like protein kinase 10 160 258 - -
Pste3g01027 580 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 278 572 - -
Pste3g01027 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Pste3g01027 580 SMART serkin_6 269 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01027 580 ProSiteProfiles Gnk2-homologous domain profile. 153 258 IPR002902 -
Pste3g01027 580 Gene3D - 161 258 IPR038408 -
Pste3g01027 580 Gene3D - 45 148 IPR038408 -
Pste3g01027 580 ProSiteProfiles Protein kinase domain profile. 258 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01027 580 FunFam Uncharacterized protein 272 338 - -
Pste3g01027 580 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 542 - -
Pste3g01027 580 ProSiteProfiles Gnk2-homologous domain profile. 45 148 IPR002902 -
Pste3g01027 580 Pfam Domain of unknown function (DUF3403) 536 580 IPR021820 GO:0004674
Pste3g01027 580 SUPERFAMILY Protein kinase-like (PK-like) 280 551 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01027 Pste-Chr3 6540389 6549785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01027 277 580 Receptor kinase-like Gene Family AT4G23140 53.797 1.36e-114 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g01027 Pkinase 1.2e-41 CL0016