Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01022 AGAAGGAGGAGGGGTAAAGAAAATATAGCCCTGATAGAAGAAGGGGCTTGAATTTGCCCTTGGGTCACACAACTCACACGTTCTATTTCTCCAGTTCAGTGCTTTGTTCATATTCGGTTGCACCACTGAAGTCAAATCTAGTTCCAGTTTGCGCCACTGATCAATGCTCCATTCACTCAGGCTCCAGGTTCCAAACTCGATCTTGTCTCTCCCCCTCGCCTTTGGTATGCTTCTGTTATGCCTAGCCAAAGGCGTGATAATGAGGTAAATCAGCCAACAAACCGGCAAATGGTTACACCCTTTTCACCTTTTCCCAATACATGAATCTATCACCAGTATGAGAATCTGTAAATGTAGTTGTTCTCTCTTGGCAACCATTCCCCCCCTGTTAATTTTACTCTTTGGTTGTGTGATCGACTTTTAGAAGATGGCCACCTAGGACTTCTGTTTGTATTTTTCATACCCTTGATTTTTAACTCTTCCAAGTAGGGAATTAAAGTTCATGGAAGAATGGCCAACATTTTCAAATGGGTCATCCTTAGATTGCCTTGGAGTTGAAACTGTTGGCGCTTTTCCTGGAAATGGTTATTGCCTGGGAAAAGATCATGTTGATAATTGTGCTGACCATCACAAACTCAAGCACAAGTGCTTGTTCTATCAACTTTTCCCTGCTTACTTGAAGGACAATTTTTTCCACGGTGGTTTTCGGCCTTTGCCGGTTTTGGTCGACGGTCAACGGCTGGATTTGTACAAACTATTCTCCCTTGTGAAGGAAAGGGGTGGGTATGCCGTGGTGTCGAAAAAAGGATTGTGGGGTTCTGTGGCCAGGGAATTGGGTTTGAAAGTTGAAGTTTGTTCATTGCTAAAACTAGTTTATGACAAGTATCTGAGTGATTTTGAAAGGTGGCTCAAGAAAACTTTCAAAGAGAAGAATTTAAAAAATGGGAAACATGGGTGTGTCCGGGGTTTTAATTGGTTGCCATTAGATATTGGGAAAGAGTTCAGAGTGCTGTTATGTCCAAATCTAAAGGACAGTGATGAACTCGGCAAATCAGAATCAAATAAAAAAAAGAAAAATACTGATTTGGCTAAACGCAAGAATGGTAATAATCTATGGGACACCAAAGATCAAAATAATAAATCTAAGGATGTCCAACACATTGACGTTGATAATGATGAAAAATCGTGTAATGGCATTATAAAAAATGCTGCTACATTGGGTGCAGAAGGAGCTGAGAAGGAATTTAACCCTCTCAAACGCAAACGGGATGCATTATCGGGCATGCTAAACTGGATGAAGCATATTGCAAAGGATCCTCTTGATCCTTTAACTGAACCAATACCAAAACCCTCAAAGTGGAAGGAGGGTAAGGGCCAGGACTTTTTTGGTCAATTTCTGAGGGCAAGAGAGGTTTTGTCACTGAGACCACATGAAGAACCAAACAGTGGATCATCTTCTTTGCAGAAGCAGAAGATGCATCCTGCCATGTATGAGGATCATGTGGCTCTTGGTCGCCATGCTACAGGGAAATTGAGATGCAGCGAAAGGCTGCCTTCCTATGTTAAATCTTGGTCATGCTCATGCTGCAATCCATGTACCCCCAATGGAAATAGATTTGCAGGCTCGCACAATATGGAGGCAGAAAAATGTCCTCTGGAGAAAAAAACTGAAACACTAGATGTATTGAGAGCAAAAACAATAGCTGAACATTGTGGGGATGAGTCCCTCGAAAAGCAAGTCTCTGTTGGTCCTCGTTTTCAAGCAGAAGTCCCAGAATGGACTGGTGTAGTTTCTGAGAGTGACTCCAAATGGTTGGGCACCCGGGTATGGTCTTTGAGACATGACACAGAACCTGCTACTGAAACAGATCTTGGGAGAGGAAGACAAGAGGAGTGCAGCTGTGAATTTCAAGGTTCTGTGGCATGCGTTAGACTACATATTGCTGAAAATAGGATGAAATTGAAGCTTGAATTGGGCTCTGAATTTTACCATTGGGGATTAGATCGAATGGGTGAGGAAGTTTCTCTTCAATGGACACCTGAAGAAGAAAAGAAATTTAAGCATATCATGAGATCAAATATTCCCTCCAAGAATAAATATTTTTGGAACAATGCATCCAAATACTTTCCAAACAAGAGAAGAAAACACTTGGTTAGCTATTACTTCAATGTATTTCTTATTCAACTAAGAACCTATCAGAATCGGGTGACTCCAAAAAGTGTTGATAGCGATGACGATGAAGTAGAATTTGGATCTTTAAGCGATGGTTTTGGGATGGACGCTGTCAATGGTGCTGGTGATGATTTAGCTGAGTGTTCGGAGAATAACCAGTCCACTGATTTCAAATAGACAAAATTAGTGTAAATTTGACAATTTTTTTTGAGGTAGTAGATTTGATAATTTGATCTGAGCCATTTTGAGCTTTAGAAAATATTTTCCTGAGGCAAACTTGTATAAAACTCTCTTCCTCCTGGATCAGTGGTGAATGCATTACTTATAGTAGAAAAATTTTGTATAATATAGGGAGGTAGATAGAGAGAAAAGAACCAGGCTGTGGAATGGTTAGTGATGGAACTTGGAAGCAAATATGGACATGTGGATAGTCTTGTCTACCCAAAATGAAGAACTTGCCGAGGCTGCTATTAATTTTGTTGGAGATTGTTTTATTTGTTGGTTGCAATAGCAGTTTAACCTAATGCTTCTTGGAGGCTGCACTAGTAGTGCTGTAAAATTAGTCGTTTAGCCCGAGCTAATACTTTCAATTGTATGTTCCTGGTCAGTATTTTGTAAATTAAATTTTATTCATGTTTTGACTTTCAAATTGAACGATTGTTTTATTTGTTGGTTGCAATAGCAGTTTAACCTAATGCTTCTTTGAGGCTGCACTATTAGTGCTGTAAAATTAGTCGTTTAGCCCGAGCTAATACTTTCAATTGTATGTTCTTGGTCAGTATTTTGTAAATTAAATTTTATTCATGTTTTGACTTTCAAATTGAACGATTTTTTCTTCG 3012 0.3971 MEEWPTFSNGSSLDCLGVETVGAFPGNGYCLGKDHVDNCADHHKLKHKCLFYQLFPAYLKDNFFHGGFRPLPVLVDGQRLDLYKLFSLVKERGGYAVVSKKGLWGSVARELGLKVEVCSLLKLVYDKYLSDFERWLKKTFKEKNLKNGKHGCVRGFNWLPLDIGKEFRVLLCPNLKDSDELGKSESNKKKKNTDLAKRKNGNNLWDTKDQNNKSKDVQHIDVDNDEKSCNGIIKNAATLGAEGAEKEFNPLKRKRDALSGMLNWMKHIAKDPLDPLTEPIPKPSKWKEGKGQDFFGQFLRAREVLSLRPHEEPNSGSSSLQKQKMHPAMYEDHVALGRHATGKLRCSERLPSYVKSWSCSCCNPCTPNGNRFAGSHNMEAEKCPLEKKTETLDVLRAKTIAEHCGDESLEKQVSVGPRFQAEVPEWTGVVSESDSKWLGTRVWSLRHDTEPATETDLGRGRQEECSCEFQGSVACVRLHIAENRMKLKLELGSEFYHWGLDRMGEEVSLQWTPEEEKKFKHIMRSNIPSKNKYFWNNASKYFPNKRRKHLVSYYFNVFLIQLRTYQNRVTPKSVDSDDDEVEFGSLSDGFGMDAVNGAGDDLAECSENNQSTDFK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01022 615 MobiDBLite consensus disorder prediction 181 215 - -
Pste3g01022 615 Pfam ARID/BRIGHT DNA binding domain 69 133 IPR001606 GO:0003677
Pste3g01022 615 SMART ARID_2 42 133 - -
Pste3g01022 615 MobiDBLite consensus disorder prediction 201 215 - -
Pste3g01022 615 SUPERFAMILY ARID-like 48 137 IPR036431 GO:0003677
Pste3g01022 615 Gene3D - 35 152 IPR036431 GO:0003677
Pste3g01022 615 ProSiteProfiles ELM2 domain profile. 411 457 IPR000949 -
Pste3g01022 615 ProSiteProfiles ARID domain profile. 45 137 IPR001606 GO:0003677
Pste3g01022 615 SMART bright_3 46 138 IPR001606 GO:0003677
Pste3g01022 615 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 43 601 - -
Pste3g01022 615 CDD ARID 51 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01022 Pste-Chr3 6521510 6527489 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pste3g01022 ARID 7.4e-13 CL0123