Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01019 GTGTCAAATACCAACGAAAGCAACTACTCACGCCAGTTTCTTCTTCTTCTTCCTCTCCTTCTCCTTCTCCTGTTGCTCAATTCTCAATCTCAAGGTTCAATTCTCCATCACCAATCCTTTCTATCTGTGATTCTGACTCATCGCTAACTCGTGAAATGATGCACTCAGTGGTAATAATTACTTTTGGATGCTGGAGATAAGGCGTGATGGGCGGTTGCTGCTGCTGTTGTTCTTCTAAGGAGATCGTGTTGAGCGCTCCACCAGCGTACTATTATCAGTATCCAAGAGCATCAGAAGAGCATGTTCCTCTATCATCTCACCAGGGTGCTACTTCTGCTTTCTCTGGGCGGCTATTGGTTGATACTAATCTAGATACTTCATCTCCTGATACGTATAGACCTCCTCCAGCTCCTATCCCTTTCAATGTTACGTTAGGCACCACTCAAACACCACCTGCGGCTCAAGAAATTCGTAGTGACAAGAATAATGCATCCTTGCATTCGACAAATTCTAATGCAATTCAAGAACCAGTTGCCGGAGACAACCATGGGACCTCAGCTAAGTTGGAAGAGCTGAAGGAATCAGAGTGCAAAGTTCAGACTGATCTAGAACTAGATTCCTCGAAGTGTTCCGAAATTGAACTTGCAAAGTCGGGAAAGCCTATAGATTTAGTAGAAGAGGAGGATACATGCCCAATTTGTTTAGAAGATGTGTATCCTTTTACCGGAGCAGAATATGAAGCAGAGAATCCAAAACTCACAACAAAATGTGACCATCATTTTCACCTTGCATGCATTCTGGAGTGGATGGAAAGAAGTGAAACTTGCCCTGTTTGCGATCAGGATTTGGTTTTCAACCCTCCCATTGAATAATACATATCAACGTAGGAATTCAAATATACTGTGTATCGTATGAGAAGCGAGGTTACAAAGTCACAAGTTTAATATGGCAGCAACACGAGATTGTGGCTGTATTTTGATTGTTTCGTTTTCTGAGTTTTCTGGGTTGATTTCATATTTTACTCAGTCCTCCGCGTTGAAGCATATACAGGAAATTAGAGGAAATATTCTGTTTTTTGTAGTTTTATCAATTAGAATGTTTTAAAGTGATGCCTGGATATTGCATCTGCATGCGAAAATAGCTGTCAATATGATTTCTCTTGTTATGGATTGCAAAACTTTTATTGTATTCTCAAAGAATGGTAGGATGATCTCACTGATTTTACTGCTCTCATCTTTTGTATATAGGGTGGGACTAGGAGTCTAGGAGTGATTCTTGTTTGAGTTATTACTTTCAAAATCTTTTGTACATAAATTTTACTTTTAAATATACTTTTTCTC 1340 0.397 MGGCCCCCSSKEIVLSAPPAYYYQYPRASEEHVPLSSHQGATSAFSGRLLVDTNLDTSSPDTYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNASLHSTNSNAIQEPVAGDNHGTSAKLEELKESECKVQTDLELDSSKCSEIELAKSGKPIDLVEEEDTCPICLEDVYPFTGAEYEAENPKLTTKCDHHFHLACILEWMERSETCPVCDQDLVFNPPIE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01019 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 217 IPR013083 -
Pste3g01019 221 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 39 217 - -
Pste3g01019 221 Pfam Ring finger domain 160 210 IPR001841 -
Pste3g01019 221 MobiDBLite consensus disorder prediction 94 110 - -
Pste3g01019 221 SMART ring_2 162 210 IPR001841 -
Pste3g01019 221 MobiDBLite consensus disorder prediction 94 114 - -
Pste3g01019 221 SUPERFAMILY RING/U-box 156 217 - -
Pste3g01019 221 ProSiteProfiles Zinc finger RING-type profile. 162 211 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01019 Pste-Chr3 6478852 6481607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01019 1 217 C3H Transcription Factor Family AT5G41350 51.818 3.99e-67 204