Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01012 ATGAAGGGAGAAGGTTGTCCCTCTGAAGCTTCTAGCATCTCTGCCACCTCTGAGGAATTTTCTCAAAAACCTAAGGTTGAAGAAGAGAACATCAATGAGTTTAGAACAACAAAGGAGAAAGGTGTCAAAACTAAACAAAATCAAGTTTCCAATTCCAATTCTTATAGGGTGTTGGATTTTGTTAAACTTCCCAAAGATGAAGAAATTCGAGGGTCAAAAGTAGAATTGGATTTTTTCAACCCTACAAACATGGTGGGTTCGTCTTCTTCTAGGGCTAATGCCATAGAAGGAAGAGACGAAAACAACAATGAAGAAAAGTCATCAGAGGCTAATAAGACTTTTTCTTGCAACTTTTGCAAGAAAGAGTTTTCTTCTTCGCAAGCATTGGGAGGGCACCAAAATGCCCACAAGCAAGAACGTGCGCTTGCAAAACGTCGCCAAGGGATTGATGTTAGTGGTTTTGGACACTCTCCTTATCTTTATTACCCTTATTCCTCGCATTGCTTTTATGGATCCTACAATAAGTCACTTGGGGTTAGAACGGAGTCTATGATTCACAAGCCATCGTATCCTTCAAACTCATTTGGTTTTAGGCTTGGCCAAGGGTGGTCATCAAGACAAGAGATTTTAAACCCTTCTCTTGATAGATTAAGGATGGAGAGTTTACATGGTAACAATGGAATTAGGATCTTAGAAAACAATAGAACTTTGAAATCAACTCAAGATGATCATGGTACTAGTAATTCAAGAAATGTTCCATTACTTGTAGAATCTTCTTCAAATGTTGCAACCAAATCAAACTCAGCCCCACTGAGTAGTGATCATTCCAAACAAGAAACACCTTCTAGTCCTGATTCTTCAGATGAGATTGATTTGTCACTTAAGCTTTAA 891 0.385 MKGEGCPSEASSISATSEEFSQKPKVEEENINEFRTTKEKGVKTKQNQVSNSNSYRVLDFVKLPKDEEIRGSKVELDFFNPTNMVGSSSSRANAIEGRDENNNEEKSSEANKTFSCNFCKKEFSSSQALGGHQNAHKQERALAKRRQGIDVSGFGHSPYLYYPYSSHCFYGSYNKSLGVRTESMIHKPSYPSNSFGFRLGQGWSSRQEILNPSLDRLRMESLHGNNGIRILENNRTLKSTQDDHGTSNSRNVPLLVESSSNVATKSNSAPLSSDHSKQETPSSPDSSDEIDLSLKL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01012 296 MobiDBLite consensus disorder prediction 87 108 - -
Pste3g01012 296 MobiDBLite consensus disorder prediction 257 296 - -
Pste3g01012 296 MobiDBLite consensus disorder prediction 21 42 - -
Pste3g01012 296 MobiDBLite consensus disorder prediction 1 49 - -
Pste3g01012 296 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 4 296 IPR044246 GO:0009788
Pste3g01012 296 Pfam C2H2-type zinc finger 114 138 - -
Pste3g01012 296 MobiDBLite consensus disorder prediction 257 289 - -
Pste3g01012 296 ProSitePatterns Zinc finger C2H2 type domain signature. 116 136 IPR013087 -
Pste3g01012 296 SUPERFAMILY beta-beta-alpha zinc fingers 111 141 IPR036236 -
Pste3g01012 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 141 IPR013087 -
Pste3g01012 296 Gene3D Classic Zinc Finger 91 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01012 Pste-Chr3 6431184 6432074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01012 107 296 C2H2 Transcription Factor Family AT5G10970 36.269 5.80e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste3g01012 zf-C2H2_6 1.2e-05 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01012 3 6431184 6432074 Pste3g01012 3 6431184 6432074 ECH