Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01010 CGGACGGATATTCCGCTGAATGAATCGATTCCTCGTTGGTTTCTGAGACACCCACCTTCGGATCTGAGACAACATTAGATCGCCACGCTTCCTTTGATTTTGTCTTCCGCTTCTTCTTCATTTCCTATTCTCAGCTTCCAATTCTTCTTCTTCTCTTCTTCTATTGTTTTCGTTCCTCTCTGTCTCATCCCTAATTCGCTACCATGAGGAAAAAACTCGACACCCGTTTCCCCGCTGTTAATGATAGTCTTGGAGATACACTTTATCATCTCAATGACTTGAAGTGCTCAAGAAGATTTATCTTAATGTTATGCCTTCCAATGTTCTCTGCCACCGAGGCTGCTGTTTTATGTATCTCTTTGATTTGGGGGATCTCCAACAGTATCCGTGCTGAGAACAGGTGGCAAGCTCGAATAAAGAAAATAATGCAAGCAGATGAGGATGTTGGAAAAATAGCATTGGCAGTTCCTGTTTTAGTATCTAAAGCTCTGGAGCTATTCTTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATGCATTGCATTTTTCCTGTAACCCCTTCAACAATGTATCAAAACATCCAGTTTGTCCTTTGAATTCTGTCTGGAGGCTAAAACCTGCGTTGGGGAACACCTCAAGCTCATGTTCTTCAGTCAACATTGGCTACCAAGGGCGGCTTAGGAAACATTGTGTGCAAAGTTATAATGTCTTTGACTTTCTGAGAGACATTGTCAGCAGGGTTCCTGACTATCATGGACATGGACATGGACATTCTGAGGCTGGAGCTGATGATCGTGCCCTTTCAAAGAGAAGGAAAGCTACTGGTGATGAGGGCATTGACAGTGATGAAGAGGCTAAGAGGAGTAAGATGCGTGAGTTGGGCCACACTGGCACTCCAGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGGCTCGAACCGTTGAAAGAGATATCTGTCATCAGCAGATGGAATCTGAGCCCTGCTCCTCTATTCAGCAAAGTGGCAATGAGGTTCCTAATAACAGTGTGCCCATAGATAATGATGTACAACCAAAGGAGTCACCAAAAGAGAAATTTGTAGTTTCTGAGGAAAGTACTCAATCTTTCCGAAACATTGATCTGAATGCCAACATAAATGAAATCGAAGATAAAGCAGCTAGCACAGCTGTTCAGGCTTCATTGCCTGAACCTGCTTCCGCGGAGATTAAACACGAAGAAATTCCAGGCTGGTCCCTATCTGATGTAGACAAGATGGCCATTGATACTATGCAGCTTGCTAACCTTGGTAGTCGACTAGAAGAGGATGAAGAAGATTATGATGAGGAAGGGTAATTAACTTACACTTTGGGGAATTAACACTGCATGAAGCTTGCTGTAACAGAGGAATAACTACTTACTAGTGCTGTGATGAGTGATGACTATCCTCTAGTAATCACTGTATGTGTCCATGCTAAGTTTCTGATAACCCCTCTCTTCTTTATCCATTCTGGTATGTATCTGTTCTCATGTAGCAGATGTAGCTTTTCTCTTTCTTAATAGTAATGTTAGCAGTTAGCTTCATGCACTTTTAGGATTTAAATGGATGCTGTTAGTTGACAACCACCTTGCTAATTCAGGAATCAGGATCAAACTCTTGGTAAAGCTTGTTTCTAGTTAATTTCATGATCAAACTCTTGGTAAAG 1723 0.4266 MRKKLDTRFPAVNDSLGDTLYHLNDLKCSRRFILMLCLPMFSATEAAVLCISLIWGISNSIRAENRWQARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHFSCNPFNNVSKHPVCPLNSVWRLKPALGNTSSSCSSVNIGYQGRLRKHCVQSYNVFDFLRDIVSRVPDYHGHGHGHSEAGADDRALSKRRKATGDEGIDSDEEAKRSKMRELGHTGTPGRGRGRGRGRGRGRGARTVERDICHQQMESEPCSSIQQSGNEVPNNSVPIDNDVQPKESPKEKFVVSEESTQSFRNIDLNANINEIEDKAASTAVQASLPEPASAEIKHEEIPGWSLSDVDKMAIDTMQLANLGSRLEEDEEDYDEEG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01010 389 Gene3D Histone, subunit A 68 188 IPR009072 GO:0046982
Pste3g01010 389 MobiDBLite consensus disorder prediction 193 300 - -
Pste3g01010 389 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 69 216 - -
Pste3g01010 389 MobiDBLite consensus disorder prediction 254 268 - -
Pste3g01010 389 SUPERFAMILY Histone-fold 75 125 IPR009072 GO:0046982
Pste3g01010 389 MobiDBLite consensus disorder prediction 269 294 - -
Pste3g01010 389 MobiDBLite consensus disorder prediction 193 240 - -
Pste3g01010 389 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 69 124 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01010 Pste-Chr3 6418579 6423621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01010 69 378 CCAAT-HAP5 Transcription Factor Family AT3G12480 40.373 5.03e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pste3g01010 CBFD_NFYB_HMF 7.9e-15 CL0012