Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01009 CCCACACATTCAAACTCCTCTGATGGAGTTGGAGACCTTCCTTTTCTTTCTGATTCTTTTCCTTTCATTCCCAATTCTCCCACCAATGTAACTCATGAGAATTGCAATGCTCTTCCTTCTCTGGACCCATTTTCCCCTTCTTTTTTCTCTTACTCACCTCCCAGTGCCCACTTGGAAAGCCTTAGCCTTTACCATGCCAACCGCGTCCATGGCCAAAACTTAGCAAATGAAAATTTTGCAAGTTTCTCAGCTTTTGATGGGTCTGAAGTGAAAAGTGAGGAATGCCAAGTGGGTCACCAACTCCTTCCTCACAGTTATAGTGGTGCTGAAAATTTTTGCAAGTACATGCAGAGGAGCATCAGCAGCAACTCCTTTGAAGGGAAACCCAGTTTTATGTCACAACCTCACAGTGACACTCTACTGGATTCTCCTGAAGACAGTGTCTTTGGTGGACAAATGAGGAGGGTTTGCAGCACAGGAGATTTGCAGAACATGAAGGCAAATCACTTGGAGGAATCCAACTTCAAAGTAGGACGTTACAGTGCGGAAGAGAGAAAAGAAAGAATTTCTAAATACAGAGCCAAGAGAACCCAGAGGAACTTCAATAAGACCATTAAGTATGCATGCCGGAAGACACTAGCCGACAATCGACCACGCATACGTGGCAGATTTGTACGCAACGACGAGGCCAGCGAAACTCCCAAGGCTTCATGTTCTATCCGAGATGAAGATGACGTCGATTTCTGGATTGAAGAATTACGATTGCATGAAGAGCAAGACGATGTAACTCTGAGAGCAGAACAGTATCTGAGAAATTGTGGAGCTAGCCAGTTTGAGTACAATGGCTTT 849 0.4464 PTHSNSSDGVGDLPFLSDSFPFIPNSPTNVTHENCNALPSLDPFSPSFFSYSPPSAHLESLSLYHANRVHGQNLANENFASFSAFDGSEVKSEECQVGHQLLPHSYSGAENFCKYMQRSISSNSFEGKPSFMSQPHSDTLLDSPEDSVFGGQMRRVCSTGDLQNMKANHLEESNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFVRNDEASETPKASCSIRDEDDVDFWIEELRLHEEQDDVTLRAEQYLRNCGASQFEYNGF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01009 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 37 247 IPR045281 GO:0009909
Pste3g01009 283 Pfam CCT motif 185 227 IPR010402 GO:0005515
Pste3g01009 283 ProSiteProfiles CCT domain profile. 185 227 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01009 Pste-Chr3 6404008 6405601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01009 181 233 C2C2-CO-like Transcription Factor Family AT5G24930 47.170 2.71e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste3g01009 CCT 3.3e-18 CL0281