Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01000 CGGAAGCCGGAAGTCACCTGTGATTCCTAAACAAACAAACCCCAAAAAGAACTCAAAGTATCCTCTGTTATCCATCTGGTTGGAAAATAAAAAAAAAAAAAAAATGTAATTTGCCTTTCAAGTAGCATTAAGAAGTATTAATGCCCCTCTTGGGGGTGCTTTTATTTTTATGAAGTCCAACCTCACATCTCGTTTGCACCGCCATTTATTAATAGCTGAGCCAGTGCCCCTCTCTCTCTCTCTCTCACACACACACTCTCATTCCTGCTATGCGCTAAAGGACAAGAACAAAAACATTACTACATTGGATGGCAGCGACAACTACAACAACTTTCCTCAAAGTTGAAAAGCAGCCCACCAAGCCCAAACGACGCAAGTATAGGGAAACTACAATCTCAGCTTCGGCAGAAGCAGAAGCAGAAGCAGCATTGCCTGAATCTCCCTCCACCAACAGGATTCGGTTCTCACCGGGGCGGTTCTCCCTTTCCCCCATAATGGACTTGACCCACTCATCCCCCTTCGCGAACGGGCAGGCCCAGGACCCCTTCCCTTCCAGCTTCTCCAAGTTCAACTCGGCCCTCACGGCGGGCCTCCTAAACCCAATGTCCCCCCCGCCCGACAAGACCCGATCCAGCCCAACCCTATTCGAGATGATGGCGAGCGAGCCCGACATCCAGCAGAGGCCCACCCCCCCGCCTTCCTCCGCCCACAAACCCCAAATTCTGGATCGCCAGGCCCTCGCCATGCAGCGGATTTCGGAGCTCCTTGGGTCCCGCAGCCCGGGGAACCAGTTCAACGACGCCCTTTCCAGTGACATCAACCTCACTCTCACCTCCAAAGATGGAATTACTGTCTCCATCAACGTCCATCGCCAAATCCTCGTTGCTCACAGTAGGTTCTTCTCCGTCAAGCTCTCCGATCGCTGGACCCAGCACCATCACCGCTCGCCTCTTCCCTACCAAGTTGAAATCGCCGATTGCGACGACGTTGAGGTTTATATCGACACCTTGCGCTTGATGTACTGTAAGGATCTTAGGAAGAAGCTCATGAGGGAGGATGTCTCCAGAGTTCTTGCTATCTTAAAGGTTTCGGCTGCAATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCGGCACCGTGGGCAGAAGATGAGGAGGAGAAGGTGGCGTCTCTCCTGTCCGAGCTTCGGCTTGAAGCAGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCAACTGATGTTGCCAATGGAAATGAAGAGGGGACTGATAATGAGGAGGTTCTTCTTAAGCTAATTCGCGTGGTTCTTGAAGGGAAGGATGAGAAGGCCAGGCGTGAGATGAAAGGGTTGGTATCAAAAATGCTCCGTGAGAATTCTTCTCAGAATGATCTACGGAAGGAGTCTTTGTACGTGGCATGTGATGAGTGTCTGCAGTTACTTCGTCAGCATTTTTTGCGGGCTGCGACTTCCGACCTGCAGGATGTGGTTCAAATTGCACGACAAGCTGATAATTTGCATTGGATTTTGGATATTTTGGTTGATCGGCAGATTGCTGAGGATTTCCTGAAAACATGGGCATCTCAAGCAGATTTAGCTGAAGCTCATTCTAAAGTGCCAGCAGTTCACAGGTTTGAGGTTAGCCGAGTTACAGCAAGGTTGTTTGTTGGGATTGGGAAAGGACAATTGCTGGCTTCCAAAGATGTTAGATGTTTGCTTCTAAAAACATGGCTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGAAGGGCATCCAAGGGCCTTGATAGACACCTAATTGAGGATGGTCTTAGTAACACGATTCTCACTCTTCCACTTTCCTGGCAACAGGATATTTTGCTTGCTTGGTTTAATCGATTCTTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCAAGAACGGACTCGACAATTACGAATTACAACTACATCAGTTGAGAACCCCTGAAGATAGATTGTTCCACTGTGGAGGAATCGGCAGCAGATTTCTGGTTTCATTGACGAAATATAAGTTTCTGACCGTGCAATGTAACTCCTGGGCAAGAGTTCAAGGTAGTTGAATGTTGTGAAGGTGTGGTTGACCTTCAATTTTCCAACTTCCTCAGATGAGCCAAAATTTTCAAGTTCAGCAATGCGTGGCAGGTTAAGTTGTTCAGTCGAGTTAATGGAAGGTTCAACATAAGGCTAATTTCTTTTGTAGTAGAGCATCCACAATAGCTTTAAATGCAAGGCAGATGAAGATGACAAGGATGAATATACTTAAATATCTTTCTTGCAAATTAGTTTGTGTTGATTATTGAATGGTATTGAATATATTCAATCGGTTGTTTTATATGAGAATAACTTCACTGGAGGTTTAACAGTGGGAATATAATTTGTTTCTTTACCGAAGAAGATTGTGGATTCTTTTTCTATTTCTTGCATTTCAACAGAAAGAGAGATTCGAAACATCCAACGGTCTTGGGATTTGTATCTTGCTAAGAAAAAGAATCTGACTTGTTCGGCATTTGGTATGTAATTTAGTGTG 2606 0.4605 MAATTTTTFLKVEKQPTKPKRRKYRETTISASAEAEAEAALPESPSTNRIRFSPGRFSLSPIMDLTHSSPFANGQAQDPFPSSFSKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDIQQRPTPPPSSAHKPQILDRQALAMQRISELLGSRSPGNQFNDALSSDINLTLTSKDGITVSINVHRQILVAHSRFFSVKLSDRWTQHHHRSPLPYQVEIADCDDVEVYIDTLRLMYCKDLRKKLMREDVSRVLAILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTDVANGNEEGTDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQNDLRKESLYVACDECLQLLRQHFLRAATSDLQDVVQIARQADNLHWILDILVDRQIAEDFLKTWASQADLAEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQDILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRQLRITTTSVENP 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01000 572 MobiDBLite consensus disorder prediction 1 53 - -
Pste3g01000 572 Pfam BTB/POZ domain 170 257 IPR000210 GO:0005515
Pste3g01000 572 ProSiteProfiles BTB domain profile. 168 246 IPR000210 GO:0005515
Pste3g01000 572 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 148 558 IPR038920 -
Pste3g01000 572 Gene3D Potassium Channel Kv1.1; Chain A 148 280 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01000 Pste-Chr3 6335010 6338922 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste3g01000 BTB 0.0003 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01000 3 6335010 6338922 Pste3g01000 3 6335010 6338922 ECH
Pste3g01000 3 6335010 6338922 Pste2g03725 2 41269117 41271698 PCT