Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00994 CCCGCCTCTCCTGATAGGTAGAGAGAGAAAAAGAGAGAGGGGGGAGCACCGGAGCAGGCATATATATCAATGATGATCATAGCATGGAGGTCATCATTGCCCCTATCTGATCTTCTATTTCTGAGGAAGTATATCTCATCTTTCTTCCTAGGTTGGTTTTCATGGTACCTCATGTTGCCTTATTAATTCACAACAGAGGAAAAACAGCTCCAACTTACCTTCTAATTTATCCTCCTCATCAATTTGGATCCACGGCACAGACACCTTCAGCTCCGCTTTCATCCAATACCAACCTACCCTAACCTTCCTATTCCACTTATCTTCCATTAAGGGTTATTTCTTAAGTCTATTGCGGGTATGATAATCAACCCTGATGAAAACACATCCCTTGCAACATAAGAAATGCAAAGTGTTGTTGGAGACACAGATTAACAAGAAGTGAAAGCAAAAGTCGGGTTAATTCCATGGCTCGACAATTGTGTGAGGACAAGTCCAAGGACATGGCTTCATCAACTGGATTGTTCTACTCAGATGTGTCATCTAATAACCCATCTATTCAACCCCATCTGATGAACCACATCCAAGGCTTTGTGAGCGACCCGGAGATGTTCAATCTCACTACTGGCATGGAGATGATAGGGTTTTCCAAGAATCTTCAGCAACATAGTGAAAGCAACGGTGTCATGTGGAAAACTTTCTTCGGCAAACCAAGTCAACACGCGGGTCCTTCCTCTTCCAAAACGATGAACGAGTCTTCTAGCATTTTTTATAACCAGCATGAGTATAATAATAATAATAAGCAAGACTTCACATCAGGGATTTCTGAGACAAGTAGTGAGAACTTAATAGTCAGTGGTGCTCATGATTCTGCCCCGTGGCAAGAGAGGCTAGTGGTTGATGATTCTTCTTTCAGGTGCGTGTTCCCATGTGAAGGTAACGAAAGGCCGAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAACCCTTCAAGTATTGGGTTGCAATCTTTTGAGCTAAGACAAACAAGCCATCAACAGCATTTTTCTGATTTTGTTTCAAGAGAGGGATTTTATGGAAAATCAGTCAATTCTCAACAACAACAACAACAAATGTTGCAAGATGGGTATATAAGTCCTAACAAAACCACGAATATTTATCAGGGACATTTCCTAATCAAGAACTCCAAGTTCTTGGTGCCTGCACAGAACCTTCTGAACGAGTTTTGTAGTCTAGGGACAAAGGAAAATGGTGTACAAAAGCACAAGTACTCACAAAAGAAGTGGGAAGAGGGTAACAGTGGCGGTTCCTCGAAGAACCCTTCTCTCAGCTCTCTAGAGTTCGTGGAATTGCAGAAGAGAAAGACACGGCTGCTCTCGATGTTGGAAGAGGTTGATAGAAGATACAAACATTACCGTAACCAAATGAAGGGTGTGGTCTCCTCCTTTGAAGCAGTGGCGGGTAATGGTGCAGCGAGTGTTTACTCGGCTTTAGCATTGAAAGCTATGTCAAGACATTTTAGGTGTTTGAAGGATGGGATTATGGATCAAATTCAAGCCACAAGAAAAGCCATGGGAGAGAAAGATCCGGTTGCACCAGGCACAACAAGGGGTGAAACACCAAGGCTAAGAATAATTGACCAATCACTGAGACAACAGAGGGCATTTCAGCAAATGAGCTTGATGGAAACCCATCCTTGGAGACCCCAACGTGGCCTTCCAGAACGATCCGTTTCGGTTCTTCGAGCGTGGCTTTTCGAGCACTTTCTCCATCCGTACCCAAGCGATGTTGATAAGCACATACTAGCCCGCCAAACGGGTCTCTCAAGAAGTCAGGCACGTGCATATATATGA 1850 0.4362 MARQLCEDKSKDMASSTGLFYSDVSSNNPSIQPHLMNHIQGFVSDPEMFNLTTGMEMIGFSKNLQQHSESNGVMWKTFFGKPSQHAGPSSSKTMNESSSIFYNQHEYNNNNKQDFTSGISETSSENLIVSGAHDSAPWQERLVVDDSSFRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTSHQQHFSDFVSREGFYGKSVNSQQQQQQMLQDGYISPNKTTNIYQGHFLIKNSKFLVPAQNLLNEFCSLGTKENGVQKHKYSQKKWEEGNSGGSSKNPSLSSLEFVELQKRKTRLLSMLEEVDRRYKHYRNQMKGVVSSFEAVAGNGAASVYSALALKAMSRHFRCLKDGIMDQIQATRKAMGEKDPVAPGTTRGETPRLRIIDQSLRQQRAFQQMSLMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQARAYI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00994 461 SMART prehox3 231 360 IPR006563 -
Pste3g00994 461 SUPERFAMILY Homeodomain-like 412 458 IPR009057 -
Pste3g00994 461 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 99 456 - -
Pste3g00994 461 CDD homeodomain 411 456 IPR001356 GO:0003677
Pste3g00994 461 Pfam Associated with HOX 237 358 IPR006563 -
Pste3g00994 461 Pfam Homeobox KN domain 428 456 IPR008422 GO:0003677|GO:0006355
Pste3g00994 461 Gene3D - 417 460 - -
Pste3g00994 461 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00994 Pste-Chr3 6299660 6302614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00994 153 457 Homeobox Transcription Factor Family AT5G41410 50.729 2.05e-93 293