Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00979 AACAAGAATATAAAAGAAGGAAGTAAAAGAAGACCACATAACAACAAGCCTAGAAATATGGGTCACCATTCTTGCTGCAATCAACAGAAGGTTAAAAGAGGACTTTGGTCTCCTGAGGAAGATGAAAAACTCATCAGATACATTACAACTCATGGATATGGATGTTGGAGTGAAGTTCCAGAAAAAGCTGGGCTTCAAAGGTGTGGCAAGAGTTGTCGGTTGAGATGGATTAATTATTTGAGACCTGATATTAGAAGAGGCAGGTTTACAGCTGAGGAGGAGAAGTTAATTATAAGCCTTCACGGGGTCGTAGGAAACAGATGGGCTCACATTGCAACCCACTTGCCTGGTCGAACTGACAATGAAATAAAGAACTATTGGAATTCATGGATAAAAAAGAAAATAAGAAAGACTTCGATGTCTTCAACCACTGTCGCACAAAGTGTCAATCACAATTCTTCCCAGTTTAATTACAATTCCAATCTTCTAGACCACTTTTCTTCCAACCAAGATAATCTACAAACAAAACCACCAGCTCAAGAAACCTTATTTTCCTCAACATGCCCTATGTTCATGTTTGACAGCAGTTCTCTAGAAGTCACAGCAACCGACTATAATAGTATGCGAGCAGAACATTTTCAAGATTCTGTGGGTTTGAGCACTGAAACTTGGAACGTGAGTCACCACCAGATTCAGGCACTTCCTTCTCTCACAGTGACTGTAGGCTTGGACAACACAAATTATTTGCCACCATTAATAGAGAATGTGGACAACATGGTCCCAATTGAGGTACAATCTTGTACCATGGACGAGCAAGGAGATATTGCACTAGATTGCTTGCAGAGGCAAGGGTTAAATGAATGGGTGGAAACGCAGCAACAATGTCCTAACTTTCTTTTCTGGGACACTGTTGAAGGACAAATTGGTGGGGAAGAACTAGCACCAAATTCGTCAAATGTGGAAGCAAATACACTTTCTCCTTTTCCTTCTTCTTTGTGA 999 0.4054 NKNIKEGSKRRPHNNKPRNMGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTAEEEKLIISLHGVVGNRWAHIATHLPGRTDNEIKNYWNSWIKKKIRKTSMSSTTVAQSVNHNSSQFNYNSNLLDHFSSNQDNLQTKPPAQETLFSSTCPMFMFDSSSLEVTATDYNSMRAEHFQDSVGLSTETWNVSHHQIQALPSLTVTVGLDNTNYLPPLIENVDNMVPIEVQSCTMDEQGDIALDCLQRQGLNEWVETQQQCPNFLFWDTVEGQIGGEELAPNSSNVEANTLSPFPSSL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00979 332 FunFam Transcription factor MYB26 87 156 - -
Pste3g00979 332 SUPERFAMILY Homeodomain-like 30 127 IPR009057 -
Pste3g00979 332 PANTHER MYB DOMAIN PROTEIN 55 20 239 - -
Pste3g00979 332 MobiDBLite consensus disorder prediction 1 24 - -
Pste3g00979 332 CDD SANT 88 131 IPR001005 -
Pste3g00979 332 CDD SANT 36 80 IPR001005 -
Pste3g00979 332 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Pste3g00979 332 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Pste3g00979 332 Pfam Myb-like DNA-binding domain 86 130 IPR001005 -
Pste3g00979 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Pste3g00979 332 Gene3D - 25 85 - -
Pste3g00979 332 Gene3D - 87 161 - -
Pste3g00979 332 SMART sant 85 133 IPR001005 -
Pste3g00979 332 SMART sant 32 82 IPR001005 -
Pste3g00979 332 MobiDBLite consensus disorder prediction 312 332 - -
Pste3g00979 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 80 IPR017930 -
Pste3g00979 332 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Pste3g00979 332 FunFam MYB transcription factor 25 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00979 Pste-Chr3 6160246 6162905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00979 20 316 MYB Transcription Factor Family AT1G63910 50.000 1.11e-96 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g00979 Myb_DNA-binding 5.1e-15 CL0123