Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00939 GAGGAGAGAAGAAGAAGAGGACGTGGCGAGGCAGTGCACGTGCGAGTCCCCTGAGCATTGGAATGGTATTGTTATTTATTAATATTAATTAATTATTGGTTTAGCATAATATGAAGGTGGTTGTGAGACTAGGGTAGGGTTGGTACTAGTGGCCACTCCCCTCCGCCGAGCAGAAACAAACCTACAAAACTCAATCGAGTCCATTCTTGTTCTATAAACAACAACTCCCTTGGTCCTCGGTGACTTGCGTCTTGCGTCTTGCGTCTTGCAACCGGGAAACGGTCATTCTTTTCTTCTTGAAACTTAAAACTTAAAACTTAAAACTAAAGCAAAGCCGATCCTTCTTCTTCGCGACATGGACGACAACTTGCTCGACGATATCATCCGAAGGCTCATCGCCGCCAAGAACGGTAGAACCACCAAACAGGTCCAGCTTACGGAGCCAGAAATTCGACAACTCTGTCTCTCCTCCAGAGAGATCTTTCTCAGTCAACCTAATCTTCTCGAACTCGAGGCTCCTATTAAGATTTGTGGAGATGTTCATGGCCAATACTCAGATCTTTTAAGGCTGTTTGAATATGGGGGATACCCACCCGAAGCAAATTATTTATTTCTTGGGGATTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATATGCTTACTCCTCGCGTACAAGATCAAATACAAGGAGAATTTTTTTCTTCTCAGGGGCAACCATGAATGTGCTTCCATCAATCGTATTTATGGTTTCTATGATGAGTGTAAGAGGAGGTTTAATGTTCGCCTCTGGAAGACATTTACTGATTGCTTTAATTGTCTACCTGTTGCTGCTCTAATAGATGAGAAGATCCTTTGCATGCATGGTGGACTATCCCCCGATCTTAAAAACTTGGATCTGATACGGAATATTGCTCGTCCTATTGATGTTCCAGATCACGGCCTTCTCTGTGATCTTCTATGGGCTGATCCTGATAAAGATCTTGATGGGTGGGGAGAAAATGACCGAGGTGTGTCATTTACATTTGGGGCTGACAAGGTTGTTGAATTTCTTGAACAACATGATCTTGATCTGATTTGCAGAGCACACCAGGTTGTAGAGGATGGATATGAGTTTTTTGCCAAGCGGCAGCTGGTAACTATATTCTCGGCACCTAATTACTGTGGTGAATTTGATAATGCCGGTGCTATGATGAGTGTGGATGACACCTTGACGTGCTCTTTCCAAATACTTAAATCTTCTGAAAAGAAAGGAAAAGGTGGATTTGGCAACAACACATCAAGACCGGGAACTCCCCCCCATAAGAGGCTGCGTGGTAACGGACTAAGGGGCATGAACGGAATCGCTATACTCTTTGGGGCAATATCCTTAACGAAGTTTATACCTTCACGTGGTCAAGGAGTTCTGATGTTAGTTGATATTCAAGTTCTCATAGTTGTTCATGAATGTCGATTCCATTGGTTTTCCTGGGTGGGAAGAATTAAGTAATTAACATTCCCGAGCAGGATGGAGGCTTTGATTCTTCGTATTAGGCTATTAGGTTAAAGGCTTATTGTTCTGCGCCTGGCATGGTTCACAACATATAAATCATGACGCCTTCCTCACTTGGCAACGAAACTAAAGACAGTGGCAGGTAGCGCGTGGCACTTTATTCTGCGACTTCGATTGACCCCTTTTCCTTCGATTTTTCCTTCTTTCTTATAGTTTTTTTTTTTTAATGTACAATGCGAATTCAAACTTTATAAGGAGAAATCCTGAATATGCTCTTCTGTTGCAAAAAATTCTAATTTA 1792 0.4247 MDDNLLDDIIRRLIAAKNGRTTKQVQLTEPEIRQLCLSSREIFLSQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKNLDLIRNIARPIDVPDHGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEQHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSEKKGKGGFGNNTSRPGTPPHKRLRGNGLRGMNGIAILFGAISLTKFIPSRGQGVLMLVDIQVLIVVHECRFHWFSWVGRIK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00939 377 SUPERFAMILY Metallo-dependent phosphatases 22 297 IPR029052 -
Pste3g00939 377 Pfam Calcineurin-like phosphoesterase 55 247 IPR004843 GO:0016787
Pste3g00939 377 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Pste3g00939 377 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Pste3g00939 377 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pste3g00939 377 Gene3D - 1 306 IPR029052 -
Pste3g00939 377 SMART pp2a_7 27 297 IPR006186 GO:0016787
Pste3g00939 377 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Pste3g00939 377 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Pste3g00939 377 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Pste3g00939 377 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Pste3g00939 377 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Pste3g00939 377 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Pste3g00939 377 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Pste3g00939 377 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 14 299 - -
Pste3g00939 377 CDD MPP_PP1_PPKL 6 294 - -
Pste3g00939 377 MobiDBLite consensus disorder prediction 299 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00939 Pste-Chr3 5919612 5923875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00939 34 243 Calmodulin-binding Proteins AT5G63870 28.000 6.78e-25 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00939 3 5919612 5923875 Pste3g00939 3 5919612 5923875 ECH