Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00915 TTTCTTGCTCACAAGTTCACTTGGCAAGTGATGGAACAGAAAAGCATTCTGATATCAGCTTTGGGTGTTGGGGTGGGAGTGGGAGTCGGACTTGGGCTGGCCTCTGGACATAGCGTTGGCAAATGGGGAGCCAACTCCTTTTCCTCAAACGCTATTACTGCTGTTAAGATGGAGCAGGAAATGCTCAGACAAGTTGTTGATGGAAGAGAAAGCAACACACGGGTTTTGCTGACAAGTGCGGCTTATGTCCATTTAAAGCATGCTGAAGTTTCTAAATACACACGTAATCTTGCCCCTGCAAGCCGGACTATTCTGCTTTCAGGGCCTGCAGAACTTTACCAGCAGATGCTTGCCAAGGCTTTAGCTCATTACTTTGAGGCCAAGTTACTTCTGTTGGATTTGACTGACTTTTCATTGAAGATTCAGAGTAAATACGGTTCTTACAACAGAGAATCTGGTTTCAAAAGATCCACGTCAGAGTCTACTTTGGAGCGACTATCTGATCTAATTGGGTCATTTTCAATCTTTTCACAGAGGGAGGAGCCCAAAGGGGGGCTGAAATATCTTGTAATCCCCCGACACTGCGTTCTGGTTTTTGTGTCAAAAACCTATCCCATTGTGATATATTTGCGGGATGTTGATAGGCTGTTATATAAATCACAAAGGATATATACCTTGTTCCAGAAAATGTTGAAGAAACTATCTGGACCAATTTTGATTCTTGGTTCCCGAGTTATAGATTCTGGTAATGACTATGAAGAGGTGGATGAGAAGCTTAATTCTCTCTTCCCATACAACATAGAAATTAGGCCCCCAGAAGATGAAACGCATCTTGTCAGCTGGAAGTCTCAATTGGAAGAGGATATGAAGATGATACAAGTTCAGGATAACAAAAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGATTCCATTTGTGTTGCAGACACAGTGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCAATTTCTTATCATTTGATGAAAAACAAAGACCCTGAATACAGAAATGGAAAGCTCGTTATTTCTTCCAATAGTTTGTCCCATGCATTGAGTATATTCCACAAGGGGAAATGCAGTAGAAGAGATACATCAAAAATGGAAGATGAAGCTGTAAAATCTGAGGTTTGCACTTGTCATGTCTGTACATTAGTTGAGAACAATACCTACCAAAAGCTGAGAGAGGAAGGAACTGGTATGAAACCAGAAGTGAAGTCTGAAAATGCTGCTCCTGTGAAAAAGGCTGAAGCAGAAACATCAACTTCAGTGGGAAAGGCAGATGATGAAAAATCAGTTCCTGCACCCCAAGCTTCCGAAGTTCCGGCCGATAATGAGTTTGAGAAGCGAATAAGGCCCGAGGTAATACCAGCAAATGAGATTGATGTTACATTCTCTGATATTGGTGCCTTAGAAGAGACCAAAGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCACTGGGGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGGCCTCCTGGCACTGGGAAGACAATGCTAGCAAAGGCCATTGCAAAGGAAGCTGGAGCCAGTTTCATTAATGTGTCTATGTCCACCATCACTTCTAAATGGTTTGGCGAAGATGAGAAAAATGTTCGCGCTTTATTCACGCTTGCGGCCAAGGTTTCTCCAACTATTATATTCGTAGATGAGGTTGATAGCATGCTTGGGCAAAGGACCAGAGTTGGGGAGCATGAAGCCATGAGGAAAATAAAGAATGAATTTATGACCCATTGGGATGGACTTTTGACAAAGCAAGTGGAGCGAATCCTTGTTCTTGCTGCAACCAATAGGCCGTTTGACCTCGATGAAGCTATTATTAGACGATTTGAAAGAAGAATTATGGTAGGATTACCATCTGTGGAGAACAGGGAAAAGATCTTGAGGACTCTTTTGGCAAAAGAAAAGGTGGACAATGATCTTGATTTTAAGGAACTTGCAACTATGACAGAAGGATATACTGGAAGTGATCTAAAGAACTTGTGCACAACTGCTGCTTATCGGCCTGTTAGAGAGCTAATTCAGCAAGAGAGGCTAAAGAGTCTGGAGAAAAAGCAGAAAGTTGCCAAGGGACAGAAAGAAGATGTCCAAGATAGTCAAGGTGCTCTAGATGGAGAAGAGGAAGTTACACAAGAAAGGGTTATTACCCTTAGGCAATTGAATATGCAGGATTTCAAAGAGGCCAAGAATCAGGTTGCAGCAAGCTTTGCAGCTGAGGGGGCAGGAATGAACGAGTTGAAACAATGGAACGATTTGTACGGAGAAGGCGGTTCAAGGAAGCAGCAGCAATTGTCTTACTTCCTTTGAAATAAACGGAGGCTGCTGTGGGGAACATTTTCTCGGTGGCTACACCTTTCCGAATTCCAATCATAGTGTCAACATTTTGCCCAAAGGCTATGAATATGATAGTTACTATGCTTATGTTGTCCTATAATATGGTGTTCTGGCAGTTTTTGTCGATCGCTAAAAGCAAAAAGTGGCCGGCGTTATTTATATCAGCAGCATTATGTATGTTATATTGGTGTTCATTAAACATGTAATGTGATGCCAGAAAAGCAATAAGAGATGTGATTCAACCTAAACACACCTTTAATAAATTATTATTTGTC 2699 0.4179 FLAHKFTWQVMEQKSILISALGVGVGVGVGLGLASGHSVGKWGANSFSSNAITAVKMEQEMLRQVVDGRESNTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSKYGSYNRESGFKRSTSESTLERLSDLIGSFSIFSQREEPKGGLKYLVIPRHCVLVFVSKTYPIVIYLRDVDRLLYKSQRIYTLFQKMLKKLSGPILILGSRVIDSGNDYEEVDEKLNSLFPYNIEIRPPEDETHLVSWKSQLEEDMKMIQVQDNKNHIMEVLAANDLDCDDLDSICVADTVVLSNYIEEIIVSAISYHLMKNKDPEYRNGKLVISSNSLSHALSIFHKGKCSRRDTSKMEDEAVKSEVCTCHVCTLVENNTYQKLREEGTGMKPEVKSENAAPVKKAEAETSTSVGKADDEKSVPAPQASEVPADNEFEKRIRPEVIPANEIDVTFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKQVERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDNDLDFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKSLEKKQKVAKGQKEDVQDSQGALDGEEEVTQERVITLRQLNMQDFKEAKNQVAASFAAEGAGMNELKQWNDLYGEGGSRKQQQLSYFL 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00915 798 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 56 797 - -
Pste3g00915 798 MobiDBLite consensus disorder prediction 411 427 - -
Pste3g00915 798 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 476 651 - -
Pste3g00915 798 Coils Coil 709 729 - -
Pste3g00915 798 ProSitePatterns AAA-protein family signature. 620 639 IPR003960 GO:0005524|GO:0016887
Pste3g00915 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 313 IPR027417 -
Pste3g00915 798 MobiDBLite consensus disorder prediction 411 456 - -
Pste3g00915 798 Gene3D - 476 648 IPR027417 -
Pste3g00915 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 476 714 IPR027417 -
Pste3g00915 798 Gene3D - 649 729 - -
Pste3g00915 798 MobiDBLite consensus disorder prediction 716 738 - -
Pste3g00915 798 SMART AAA_5 513 650 IPR003593 GO:0016887
Pste3g00915 798 Pfam ATPase family associated with various cellular activities (AAA) 517 647 IPR003959 GO:0005524|GO:0016887
Pste3g00915 798 Gene3D - 61 300 IPR027417 -
Pste3g00915 798 Pfam AAA+ lid domain 670 712 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00915 Pste-Chr3 5714985 5720749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00915 477 726 Calmodulin-binding Proteins AT3G56690 36.759 3.70e-43 167