Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00910 GAGGCTTAACAATAACCAAATGATAGGTCAAATGATGGCTGGTCTAGTGAATAAAAAACAAGAATGGATTGACAGAAACCAATATGAGGAGGAAAGAAGCCAAAGATTAACAGTCAAAACCAATGACATGGCCAAGCAGAGAAATGTAGATCAGCTAATACAGGGCGGAGCAGATGTGAAGACTGGCCCGGATGATGAGATATTAGGAGCAACAGTTATCAACAATGACATTATTGATCAAATAAACCATGACCAACAAATCCTGGAAAAACAGCACATTAAGGGAACCTTCCACATAGAAGAAATGGGAAAAGTAGATAAGCAACAAAAGTGTAGGCGTCCAAACAGTTGTTTGCAAAAGAAATATACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCCATTAAGTATTCCCTATCTGAGGGAGAATATGGACCTGCTTTCAGAAGAGAGCTAGAGAATAATCAGGAAATAGTTATTAAGCAGCATGCATTCTCAAGCTTACAGGAACAGAAGGTGTTTATGTCAGAATTTCAATTGCTAATAAACGTGAGACATGAAAATGTGATCATGCTGTTGGGGTCATGTATACGATTAAGTCAATTGCTGATTGTATATGAAAAGGCATGCAATGGTTCACTTGACCATTACTTACCAAGAGAAAGGGTGAAAGTTACAATAGGTGTTGCCAGAGGTCTAAAATATCTACATGAGAGAAATATAGTACATGGAGGAATAAAACCAACTAACATTCTTCTAAATCATGAATTCAAACCACAGGCATGCAGGAATAAAATTGAAAAACTCAAATCTGTCAGAAGTAACAAAGTGTCAAAAGATGAGGAGGAGTTACTGAAAGAAGAAGATTTAAGCACAGTAAATACTGAAGAGACAATGAGGAATCACACTGAGAATAGTGAAGAAAAAAAGGACAACACAACTTGTAGTAAAGGCAATAATGAAACAGAATACCTCGTGATGCCACATGGTCCTGACAATACGGGGGATCTCACCCTTTCTAGCGCCCCCTTCCAGGAGACTTGGTGGTTCGTCACCTATGCCGATGAGAAGACCAAACAGAATGAAAGAACGATGAGG 1102 0.3848 MIGQMMAGLVNKKQEWIDRNQYEEERSQRLTVKTNDMAKQRNVDQLIQGGADVKTGPDDEILGATVINNDIIDQINHDQQILEKQHIKGTFHIEEMGKVDKQQKCRRPNSCLQKKYTYEELQAATEGFSIKYSLSEGEYGPAFRRELENNQEIVIKQHAFSSLQEQKVFMSEFQLLINVRHENVIMLLGSCIRLSQLLIVYEKACNGSLDHYLPRERVKVTIGVARGLKYLHERNIVHGGIKPTNILLNHEFKPQACRNKIEKLKSVRSNKVSKDEEELLKEEDLSTVNTEETMRNHTENSEEKKDNTTCSKGNNETEYLVMPHGPDNTGDLTLSSAPFQETWWFVTYADEKTKQNERTMR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00910 361 Gene3D Transferase(Phosphotransferase) domain 1 204 301 - -
Pste3g00910 361 Gene3D Phosphorylase Kinase; domain 1 89 202 - -
Pste3g00910 361 Pfam Protein tyrosine and serine/threonine kinase 131 253 IPR001245 GO:0004672|GO:0006468
Pste3g00910 361 PANTHER OS01G0253100 PROTEIN 85 266 - -
Pste3g00910 361 MobiDBLite consensus disorder prediction 272 333 - -
Pste3g00910 361 SUPERFAMILY Protein kinase-like (PK-like) 108 253 IPR011009 -
Pste3g00910 361 MobiDBLite consensus disorder prediction 272 311 - -
Pste3g00910 361 ProSiteProfiles Protein kinase domain profile. 128 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00910 Pste-Chr3 5693520 5696900 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00910 108 273 Trihelix Transcription Factor Family AT1G70460 35.714 2.74e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pste3g00910 PK_Tyr_Ser-Thr 1.8e-19 CL0016