Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00904 GTCAGAAGTTTTAAAGAGGCGACAGATGACACATGCACAGACTTGGTCTGGTCTTGTTCTGACTTGTCCTCATTGACCTTAGTCGATGGGCAACTGCAGCAGCAGCGGAGCCACTTACTCCGAGTCCGACGAGGCTCCACGCGACAAGGGTATTATAAGAGTCCTCCCACCGAACTCATCGACGGGCCGCGTGCTGGGCCGGCCCATGGAAGACGTGCGGTCCATGTACATCTTCGGGCGGGAACTGGGGCGCGGGCAGTTCGGCGTGACGTACCTTGTGACCCACAAAACGACCAAGGAGCAGTTCGCCTGCAAGTCCATCGCGACCCGCAAGCTCGTTGACCGCGACGACATCGACGACATTCGCCGCGAGGTTCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTCAAGGGCGCCTACGAGGACCGCCACTCCGTCAACCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCACCAAAGGACACTACTCCGAGCGCGCCGCCGCCAACTCCTGCCGCCAGATCGTGACGGTCGTGCATAACTGCCACTCCATGGGAGTGATGCATAGGGACTTGAAGCCCGAGAATTTCTTGTTGCTCAGCAAGGACCTTCATTCACCCCTCAAGGCCACGGATTTTGGCCTCTCTGTCTTTTTTAAGCCTGGAGATGTGTTTAGAGACCTTGTTGGGAGTGCTTACTATGTTGCTCCTGAGGTACTGAGAAGAAATTATGGGCCTGAAGCTGATATTTGGAGTGCAGGAGTTATATTGTACATTCTGCTTTCTGGTGTTCCACCTTTCTGGGCAGAAAATGAACAGGGTATCTTTGATGCTGTTCTTCGTGGACATATTGATTTTGCATCAGATCCTTGGCCTTCCATATCAAGTAGTGCTAAAGATCTGGTAAAAAAGATGCTAAGAGCTGACCCTAAAGAACGGCTTTCAGCAGTTGAAGTACTTAATCATCCCTGGATGAGAGTGGATGGAGATGCATCTGATAAGCCTCTTGATATTGCTGTTTTAAGCAGAATGAAACAATTCCGGGCAATGAACAAGCTGAAAAAAGTAGCTCTAAAGCTGACTAGATCGAAGGATAGATGCTTTTGCGCCTATCAAGCTAATACTTTGGGTACTAGTGAATCTGTCTCCTCATTAACCAATGTTATTGCTGAAAACCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTCAAATCCATGGATACAGATAACAGTGGAACAATCACATTTGAAGAGTTGAAAGCTGGTCTCCCAAAATTGGGTAGTAAACTTTCCGAGTCTGAAGTTAGGCAGTTGATGGAAGCGGCCGATGTAGATGGAAATGGAACCATTGATTACATTGAATTTATAACTGCTACCATGCACATGAATAGAATGGAAAGAGAGGATCACATATATACAGCCTTCGAATATTTTGACAATGATAAGAGCGGGTACATCACAAAGGAAGAGTTGGAATCTGCCCTTAAGAAGTACAATATGGGTGATGAGAAAACAATAAAAGAAATCATTGCAGAAGTTGATACTGACAACGATGGAAGAATTAACTATGATGAGTTTGTAGCCATGATGAGGAAAGGCAACCCAGACATAACGCACACTACCCATAGACGTCGCAAATAAGCTCTGCATTGCTTTGCTAGGTTCTTCAGAGTCTCTACACGTTTTAGAATTACGGCCTGCTATTTGATTAGGGTTTAGGCAGTTGCATGATATTTGTGGGTCTAGTTGAAAATTTTCATTTCTACTGCCTGAGAAGACATGAATGTGTACAAATCAAAGATAAAACAGATCAATCTTTTTTTTCACTAGTGAGGTAAAGAAAAGTTAGGTTTTATTGAGTTTGTCTCTTGGTTTATGCTGAGTGATATCTTGGCAATTAATTTTAGCAGAGAGATTTAAACTCGTGACTTTTTCTCCCCCTTCTCCCTTTCATATACATTTTGTCACTACAAAACCTTATCATTCTCACCTTTGAAATTAAATTGATCGTTCCTTAACTCA 2056 0.4533 MGNCSSSGATYSESDEAPRDKGIIRVLPPNSSTGRVLGRPMEDVRSMYIFGRELGRGQFGVTYLVTHKTTKEQFACKSIATRKLVDRDDIDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLSKDLHSPLKATDFGLSVFFKPGDVFRDLVGSAYYVAPEVLRRNYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAVLRGHIDFASDPWPSISSSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKLTRSKDRCFCAYQANTLGTSESVSSLTNVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHIYTAFEYFDNDKSGYITKEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDITHTTHRRRK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00904 529 Pfam Protein kinase domain 50 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00904 529 ProSiteProfiles EF-hand calcium-binding domain profile. 413 448 IPR002048 GO:0005509
Pste3g00904 529 Pfam EF-hand domain pair 382 442 IPR002048 GO:0005509
Pste3g00904 529 Pfam EF-hand domain pair 452 514 IPR002048 GO:0005509
Pste3g00904 529 ProSitePatterns EF-hand calcium-binding domain. 426 438 IPR018247 -
Pste3g00904 529 Gene3D Transferase(Phosphotransferase) domain 1 134 313 - -
Pste3g00904 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 509 - -
Pste3g00904 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Pste3g00904 529 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Pste3g00904 529 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Pste3g00904 529 FunFam calcium-dependent protein kinase 1 134 313 - -
Pste3g00904 529 SUPERFAMILY EF-hand 373 514 IPR011992 -
Pste3g00904 529 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Pste3g00904 529 SMART efh_1 381 409 IPR002048 GO:0005509
Pste3g00904 529 SMART efh_1 453 481 IPR002048 GO:0005509
Pste3g00904 529 SMART efh_1 417 445 IPR002048 GO:0005509
Pste3g00904 529 SMART efh_1 488 516 IPR002048 GO:0005509
Pste3g00904 529 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Pste3g00904 529 ProSiteProfiles EF-hand calcium-binding domain profile. 449 483 IPR002048 GO:0005509
Pste3g00904 529 SMART serkin_6 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00904 529 ProSiteProfiles Protein kinase domain profile. 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00904 529 CDD STKc_CAMK 48 305 - -
Pste3g00904 529 Gene3D Phosphorylase Kinase; domain 1 50 133 - -
Pste3g00904 529 SUPERFAMILY Protein kinase-like (PK-like) 29 328 IPR011009 -
Pste3g00904 529 FunFam Calcium-dependent protein kinase 1 50 133 - -
Pste3g00904 529 MobiDBLite consensus disorder prediction 1 32 - -
Pste3g00904 529 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Pste3g00904 529 Gene3D - 314 519 - -
Pste3g00904 529 FunFam Calcium-dependent protein kinase 1 360 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00904 Pste-Chr3 5653100 5659847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00904 31 528 EF-hand Containing Proteins AT4G23650 75.703 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste3g00904 Pkinase 3.2e-73 CL0016