Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00899 AAAGAAAAAGAAAAAGGAAAAGGAAAACATGTAAATACCAAAATCCTCCTCAAAACTTGGTTCTTTCTTTTCTTTCTTTCCCTTTGTTGAGCAACCACTTTCCCTCTTTCTCTCTCTAAAACCCTTTCTAGATTTCCTTCATCATTAGCTTAATTGATCAAGCTTAAGTGCTTTCCTTTACTTCACCCCATGGATCTACCATTCACACCCCTGCCTCGCAAATAAGAGATCCTGCGAGCGAGTGAGTTTCAATTCGGAGTTTCGATTTTGGATCAAAGCAGTTGCGCCGCGTTTGGTGGCAGATAAATAGAGCGCAGCTGAGAGAAGAGGGAGAGAGAGGGAGGAAAAAAAAAAGACGAAATGAAAATCCCTTGTTGTTCGGTTTGCCAAACGCGGTATAACGAGGAGGAGCGCGTTCCGCTGCTGCTCCAATGCGGCCATGGCTTTTGTAGAGACTGTCTCTCGCGAATGTTCTCGGCGTCGTCTGATGCCACGCTGGCGTGTCCGCGGTGCCGCCACGTGTCCACCGTCGGAAACTCGGTGCAGGCGCTGAGGAAGAACTACGCGGTGCTCGCGCTGTTGCACTCGGTGGCTGCCGCCGCCGCCAACGGCGGCGCCGTGCGGTCGAATTTTGACAGCGATTACACCGACGAGGAGGAGGAAGGTGAGGGCGGCCGAGGGGAGGAGGATGAGGAGGATGACGAGAAGCGGAGGCGGAACAGCCGCGCGTCGCAGGCGTCGAGCTCCGGCGGCGGGTGCGAGCCGGTGATCGAGGTTGGCGGCGGCGCGCACCAGGATTTGAAGCTGGTGCGGCGGATAGGGGAGGGGAGGAGGCCGGGAGTGGAGATGTGGATGGCGGTGATCAGCGGTGGAGGGGAGGGAGGACGGCGGTGTCGGCACAGCGTGGCGGTGAAGAAGGTGGCGGTGGCGGAGGAGATGGATTTGGATTGGGTGCAGGGGAAGTTGGAGGATTTGCGAAGGGCTTCGATGTGGTGTAGGAATGTGTGCACTTTCCATGGGACAATGAGAGTGGAAGAGAGTTTGTGTCTTGTTATGGATAAGTGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAACGAGGGGAGACTCACCTTGGAACAAGTTCTAAGATATGGAGCGGACATTGCACGAGGGGTAGTTGAGCTTCATGCTGCAGGTGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTTGATGCAAATGGTCACGCTGTGGTTTCTGATTATGGACTTGCTACAATTCTTAAAAAGCCTTCCTGTTGGAAGGCTCGACCAGAGTGTGACTCTGCCAAGATCCATTCCTGTATGGAATGCATAATGCTCAGCCCACATTATACAGCACCGGAGGCTTGGGAACCTGTGAAGAAATCGTTAAATTTGTTTTGGGATGATGGAATAGGTATATCTTCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTTCCATTCCTTGGGCAGGCTTAAGTGCGGATGAAATCTATCGAGCTGTCGTTAAAGCTAAGAAACTACCTCCACAGTATGCTAGTGTGGTTGGTGGTGGAATTCCGAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTCAGTGCAATGCTGGCAATATTTCTCCGTCATTTGCAGGAGATACCACGCAGTCCTCCTGCAAGCCCTGATAATGGCATAGATAAGGGCTCTGTGTCAAATGTGATGGAGGCTTCACCGGTACCAGAATTGGAAGTTCCTCAGGAAAACCCTAACCATCTGCATCAACTAGTGTCTGAAGGAGATACCGCAGGTGTTAGAGATCTTCTCGCAAAGACTGCTTCAGAAAATGGCAGCAACTACCTATCTTCGCTATTGGAAGCTCAAAATGCTGATGGGCAAACGGCTCTCCACTTAGCTTGTAGACGTGGTAGTGCAGAACTTGTTGAGACGATTCTGGAGTATAGAGAAGCAAATGTTGATGTATTGGACAAGGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGGTCCCCAGAATGTGTTCACAGCCTTATAAAAAGAAATGCTAATGTGCGGTCACGATTGAGGGATGGTTTTGGCCCATCGGTAGCTCATGTTTGTGCCTATCATGGCCAACCAGATTGTATGCGAGAATTATTATTAGCTGGAGCTGATCCTAATTCAGTGGATGATGAAGGTGAATCTGTTCTGCATAGAGCAATTGCCAAAAAATACACAGACTGTGCTCTTGTGATATTGGAGAATGGAGGCTGTAGATCAATGGCCATCTTGAATTCAAAGAACCTGACACCACTGCACTTGTGTGTTGCAACATGGAACGTTGCCGTTGTGAAGAGATGGGTGGAAGTTGCAGCTTCTGATGAGATTGCTGAAGCAATTGACATACCAAGCCCTATTGGTACTGCCTTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAGAGTGAGGGAAGAGAACTGGTGCGGATATTGCTTGCAGCGGGTGCTGATCCATCTGCTCAAGATTCACAGAATGGGAGGACAGCTTTACATACAGCTGCTATGACTAATGACGTGGACTTGGTTAAGGTTATTCTAGCTGCTGGGGTTAATGTGAACATCCGCAATGTGCACAACAGTATACCTCTTCACTTAGCCTTAGCTAGGGGTGCAAAGGCATGTGTTGGACTGCTTATAGCTGCTGGAGCGGATTATAATTTGCAGGATGACGATGGTGACAATGCTTTTCATATAGCAGCAGAGACAGCGAAGATGATTCGTGAAAATCTCGACTGGCTTATTGTCATGCTAAAGAATCCTGATGCTGACATTGAAGTCAGAAACCACAGTGGCAAGACACTACGTGACATTTTAGAGGCTCTCCCACGAGAATGGTTATCTGAAGATCTGATGGAAGCACTCATGAATAGGAGAGTTCATTTGTCTCCTACAACATTTGAAGTGGGAGACTGGGTGAAATTTAAAAGATCTGTCATAACTCCAACACATGGATGGCAAGGTGCTAAACCAAAGAGTGTTGGTTTTGTGCAAAGTGTTACAGACAGAGATAATCTCATTGTTTCATTTTGTTCTGGAGAGGTTCATGTTCTGGCAAATGAAGTTATAAAAGTCATTCCATTGGATAGGGGACAACATGTACAACTGAAAGAAGATGTAAAAGAGCCTAGGTTTGGTTGGCGTGGGCAGTCTCGTGACAGTATTGGGACAGTATTATGTGTTGATGAAGATGGAATCCTCCGTGTTGGATTTCCTGGAGCATCCAGAGGATGGAAGGCTGACCCAGCCGAGATGGAACGTGTGGAGGAATTCAAGGTTGGAGATTGGGTTCGTATTCGTCCAACTCTTACATCGGCAAAGCATGGACTAGGATCTGTAACACCAGGAAGCATTGGCATTGTATATTGTATCCGACCAGACAGTAGTCTGTTAATAGAACTGAGCTATCTTCCAAATCCATGGCATTGTGAACCAGAAGAAGTTGAACATGTTGCTCCTTTTAGGATTGGTGATCGGGTATGTGTAAAACGATCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTCTTAATAATAGATATACCAAATCGACCAATACCATGGCAAGCTGATCCATCAGATATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTAAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGATGGGAGGATGTTACAAGAAATAGTATTGGGGTAATTCATAGCTTGGAGGAGGATGGCGACATGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTCACTGATGTGGAGAAGGTTCCTCCATTTGAGGTGGGACAAGACATTCATGTGATGCCATCTGTTACTCAGCCACGGCTTGGGTGGTCAAACGAATCACCAGCTAGTGTTGGAAAAATAACAAGAATTGACATGGATGGTGCTCTCAATGTGAGGGTTACAGGCAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGGCTTCCAGGATTTGAAGTTGGGGATTGGGTACGCTCAAAACCAAGCCTGGGAACCAGACCAAGCTATGATTGGAATAGTGTTGGGCGAGAGAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTAGAGTTGGCTTGCTGTTTTCGCAAAGGGAAGTGGATCACTCATTATACAGACGTTGAAAAGGTTCCTAGCTTTAAAGTTGGGCAATATGTTAGGTTTCGAACTGGTTTGTCTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAAGGGGTTATAACTAGCATTCATGCTGACGGAGAAGTCAGGGTTGCATTTTTTGGTCTGGCAGGACTGTGGAGGGGAGATCCTTCAGACCTTGAGATTGAACAAATATTTGAAGTGGGAGAATGGGTGAGGTTGAAAGACAATGCAAATAATTGGAAATCAATTGGGTCAGGTAGCGTTGGTGTCGTTCAAGGAATAGGGTACGAAGGAGATGAGTTGGACAGAAACATATTTGTTGGATTTTGTGGAGAGCAAGAAAAGTGGGTAGGACCAAGTTCCCATCTTGAGAAGTTTGACAGACTCTTTGTTGGACAGAAGGTTAGAGTAAAACATTATGTAAAGCAACCAAGATTTGGATGGTCGGGGCATACCCATGCTAGTATTGGGACTATACAAGCAATTGATGCAGATGGAAAGCTCCGAATATACACTCCAGCAGGATCCAGAACATGGATGTTGGACCCATCTGAAGTGGCAGTGGTAGATGAGAAGGAGCTATGTATTGGAGACTGGGTTAGGGTTAAAGCATCAATTTCAACCCCAACCCACCATTGGGGGGAAGTGAGTCATTCAAGTGTTGGGGTGGTTCATCGGATGGAAGACGAGGATCTGTGGGTGGGGTTCTGTTTCACAGAGAGGCTATGGCTTTGTAAGGCATGGGAGATGGAACGGGTTAGGCCATTTAAAGTGGGGGACAAGGTAAGGATCAGAGATGGACTGGTGACCCCACGATGGGGATGGGGAATGGAGACGCACGCCAGCAAGGGACAGGTTGTAGGGGTAGATGCAAATGGTAAACTAAGAATAAAATTCCGGTGGAGGGAAGGTAGGCCATGGATAGGAGACCCTGCAGATATTGCCCTTGATGAGGACTGATATACTATTTTAGGAACATGGAAGGTTGTATCATAACTAAATTCTCATTCAGCTCTTTAGCCTATGTTTTTCTGGGCTGAGCTTGTGCAAAGTGGAAAGCTTTATGTGCTCTGAACCATAACTCCTTTCTCAAGGTTGGAATGCAGTTTGGTCACATGTATTGGTGATGTTAATAAACAGAGGAGTGAAAGAATTGAAGCTGTGGAGATAGAAACATTGGCTTGCTGACCGAGTGTGGGGATTTAAAGGCAGTTTAAACAATATTGGCAGTTCCTACATTTATATTCATTACTCTAAGTTTGTAGTCCCAGATTTTGAGGTGTATATCATATGTATGTCTATTTCATATTGTACAAATTGTACTCAACAGACAACTTAATGCATTTTTTTGACTCACTATTATGCAGTTGCATAATTCTTAATAGAATTGATTTC 5703 0.4634 MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRDCLSRMFSASSDATLACPRCRHVSTVGNSVQALRKNYAVLALLHSVAAAAANGGAVRSNFDSDYTDEEEEGEGGRGEEDEEDDEKRRRNSRASQASSSGGGCEPVIEVGGGAHQDLKLVRRIGEGRRPGVEMWMAVISGGGEGGRRCRHSVAVKKVAVAEEMDLDWVQGKLEDLRRASMWCRNVCTFHGTMRVEESLCLVMDKCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATILKKPSCWKARPECDSAKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISSESDAWSFGCTLVEMCTGSIPWAGLSADEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFSAMLAIFLRHLQEIPRSPPASPDNGIDKGSVSNVMEASPVPELEVPQENPNHLHQLVSEGDTAGVRDLLAKTASENGSNYLSSLLEAQNADGQTALHLACRRGSAELVETILEYREANVDVLDKDGDPPLVFALAAGSPECVHSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELLLAGADPNSVDDEGESVLHRAIAKKYTDCALVILENGGCRSMAILNSKNLTPLHLCVATWNVAVVKRWVEVAASDEIAEAIDIPSPIGTALCMAAASKKDHESEGRELVRILLAAGADPSAQDSQNGRTALHTAAMTNDVDLVKVILAAGVNVNIRNVHNSIPLHLALARGAKACVGLLIAAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLKNPDADIEVRNHSGKTLRDILEALPREWLSEDLMEALMNRRVHLSPTTFEVGDWVKFKRSVITPTHGWQGAKPKSVGFVQSVTDRDNLIVSFCSGEVHVLANEVIKVIPLDRGQHVQLKEDVKEPRFGWRGQSRDSIGTVLCVDEDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDVTRNSIGVIHSLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQDIHVMPSVTQPRLGWSNESPASVGKITRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSFKVGQYVRFRTGLSEPRWGWRGAQPESQGVITSIHADGEVRVAFFGLAGLWRGDPSDLEIEQIFEVGEWVRLKDNANNWKSIGSGSVGVVQGIGYEGDELDRNIFVGFCGEQEKWVGPSSHLEKFDRLFVGQKVRVKHYVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSRTWMLDPSEVAVVDEKELCIGDWVRVKASISTPTHHWGEVSHSSVGVVHRMEDEDLWVGFCFTERLWLCKAWEMERVRPFKVGDKVRIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADIALDED 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00899 1635 ProSiteProfiles Ankyrin repeat profile. 770 802 IPR002110 GO:0005515
Pste3g00899 1635 ProSiteProfiles Ankyrin repeat region circular profile. 522 544 - -
Pste3g00899 1635 Gene3D - 467 590 IPR036770 -
Pste3g00899 1635 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Pste3g00899 1635 ProSiteProfiles Ankyrin repeat region circular profile. 737 768 - -
Pste3g00899 1635 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 83 IPR013083 -
Pste3g00899 1635 FunFam E3 ubiquitin-protein ligase KEG 736 869 - -
Pste3g00899 1635 SUPERFAMILY Protein kinase-like (PK-like) 142 451 IPR011009 -
Pste3g00899 1635 SUPERFAMILY Ankyrin repeat 518 815 IPR036770 -
Pste3g00899 1635 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Pste3g00899 1635 ProSiteProfiles Ankyrin repeat profile. 737 769 IPR002110 GO:0005515
Pste3g00899 1635 SMART ring_2 6 51 IPR001841 -
Pste3g00899 1635 CDD RING-HC_KEG-like 3 59 - -
Pste3g00899 1635 Pfam Ankyrin repeats (3 copies) 716 801 IPR002110 GO:0005515
Pste3g00899 1635 Pfam Ankyrin repeats (3 copies) 597 676 IPR002110 GO:0005515
Pste3g00899 1635 Pfam Ankyrin repeats (3 copies) 485 584 IPR002110 GO:0005515
Pste3g00899 1635 PRINTS Ankyrin repeat signature 523 538 IPR002110 GO:0005515
Pste3g00899 1635 PRINTS Ankyrin repeat signature 719 733 IPR002110 GO:0005515
Pste3g00899 1635 ProSiteProfiles Ankyrin repeat region circular profile. 770 802 - -
Pste3g00899 1635 MobiDBLite consensus disorder prediction 94 110 - -
Pste3g00899 1635 Pfam Protein kinase domain 179 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00899 1635 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Pste3g00899 1635 FunFam E3 ubiquitin-protein ligase KEG 462 692 - -
Pste3g00899 1635 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1634 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Pste3g00899 1635 Gene3D Transferase(Phosphotransferase) domain 1 235 464 - -
Pste3g00899 1635 Gene3D - 591 736 IPR036770 -
Pste3g00899 1635 FunFam E3 ubiquitin-protein ligase KEG 236 452 - -
Pste3g00899 1635 Pfam Mind bomb SH3 repeat domain 1058 1122 IPR040847 -
Pste3g00899 1635 Pfam Mind bomb SH3 repeat domain 1381 1502 IPR040847 -
Pste3g00899 1635 Pfam Mind bomb SH3 repeat domain 878 922 IPR040847 -
Pste3g00899 1635 Pfam Mind bomb SH3 repeat domain 929 996 IPR040847 -
Pste3g00899 1635 Pfam Mind bomb SH3 repeat domain 1254 1375 IPR040847 -
Pste3g00899 1635 Pfam Mind bomb SH3 repeat domain 1511 1629 IPR040847 -
Pste3g00899 1635 Pfam Mind bomb SH3 repeat domain 1128 1246 IPR040847 -
Pste3g00899 1635 ProSiteProfiles Ankyrin repeat profile. 522 555 IPR002110 GO:0005515
Pste3g00899 1635 Pfam RING-type zinc-finger 6 49 IPR027370 -
Pste3g00899 1635 SUPERFAMILY RING/U-box 5 61 - -
Pste3g00899 1635 ProSiteProfiles Protein kinase domain profile. 147 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00899 1635 Gene3D - 737 853 IPR036770 -
Pste3g00899 1635 SMART ANK_2a 522 552 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 803 838 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 556 585 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 737 766 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 697 732 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 770 799 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 591 620 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 659 690 IPR002110 GO:0005515
Pste3g00899 1635 SMART ANK_2a 624 655 IPR002110 GO:0005515
Pste3g00899 1635 MobiDBLite consensus disorder prediction 88 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00899 Pste-Chr3 5619083 5633041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00899 139 445 MAP Kinase Kinase Kinase AT1G53570 24.522 1.11e-16 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pste3g00899 Pkinase 3.1e-29 CL0016