Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00888 AAAGAAAATAAAAATAAGTAAATTATTAATTTTGAAATTGTGGGCTTGAACATGCATAAAGAAGAAGTGAGCTGGTGAGGACAGTGGTAGTGGGGCAGCAGCGATCCGTATTAACTTCAATCATATTCTTCGAGGAAGTTTCCGGTGGATCGTCTCGGAAGATGAACGACTCAGATGTCTCAAAGCAAATCCAGCAGATGGTGAGGTTCATCCGGCAGGAAGCGGAGGAAAAAGCCAACGAGATCTCTGTCTCCGCCGAAGAGGAATTCAATATCGAGAAGCTTCAGTTGGTTGAAGCCGAAAAGAAGAAGATCAGGCAAGAGTACGAACGCAAAGACCGCCAAGTCGAAATTCGCAAGAAGATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTTTTGAATGTCAGCCATCATCATCATTTTGATATACTGAGTCATCATCATCATGAGTACAGAAACCTTCTGAAAGATCTCATTGTTCAGTGTTTGCTAAGACTGAAAGAATCATCTGTCCTACTGAGATGTCGGAAAGATGATCTGCACTTGGTAGAGCACGTGCTGGATTCAGCTGCCCAGGAGTATGCTGATAAAGCAAATGTTGATCCCCCAGAGATCATCATTGACAAACAAGTCTATCTTCCACCTGGACCCAATCATCACGATACTCATGATCTCTACTGCTCTGGTGGTGTGGTGTTGGCATCTCGTGATGGAAAGATTGTTTGTGAAAATACTCTTGATGCACGACTTGATGTAGTGTTCCGTAAAAAGCTACCAGAGATCCGAAAGCAGCTTTTTGGACAAGTTGTTGCCTGAAGATATTTATTCTATTGCGTCGTTAGCCCTGGAATGTTTATATCTCAAAGCATTAGGTTGTCTTGGACCTAAATAGCTATCATGTCATTGTTTCTGTCCACTTATATTGTCTTTCGAAAACACCATACTTCAGTTGTTCCCATATCGTGTATGCATAGTTCTAAATTTTCTTTAGTGATGATTGTTATCACCTTGACGATAATGTTTGCTCCGTCGCATTGAACCTTTGAACTTGGTAATAAAGTAGCAGATATAATAATATATTGAACATTGCTGTCA 1160 0.4095 MNDSDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKDRQVEIRKKIEYSMQLNASRIKVLQAQDDVISSMKEAASKELLNVSHHHHFDILSHHHHEYRNLLKDLIVQCLLRLKESSVLLRCRKDDLHLVEHVLDSAAQEYADKANVDPPEIIIDKQVYLPPGPNHHDTHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVVA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00888 239 Gene3D - 1 62 - -
Pste3g00888 239 Gene3D - 93 237 IPR038495 -
Pste3g00888 239 Coils Coil 38 61 - -
Pste3g00888 239 SUPERFAMILY V-type ATPase subunit E-like 87 235 - -
Pste3g00888 239 Pfam ATP synthase (E/31 kDa) subunit 16 234 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pste3g00888 239 Hamap V-type proton ATPase subunit E [atpE]. 8 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pste3g00888 239 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 236 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00888 Pste-Chr3 5524435 5528367 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00888 1 239 Primary Pumps ATPases(2) AT4G11150 72.803 1.06e-124 351