Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00887 GTTGTTTCTGAATTACAAGGCATAGCAGGCAGTGAACTCTGCCACATGACAGACGATATTACTCCACTTATATCAGATTCAAGAATTGTGCTAGATATAAATGGCTCACAAGGTACAAAGGTAACCAATGAAGGACCACAAATAAGCCCGAGAAATTCTGATAAACTGAGCCAGATTGAAGAACAGATGCAGAGCAGGCAAAAAGGGGAGGAGAGGATCTCAGGAAAGATGATAATCAATGACCAAGAAATGGATCAGACAGTAGTTGATCAGCTGAGCGAGTTTGAAGAACAGGTGCCAACCACCCTTAATAGAGAGGGCATCACAACTCAGAACATTAGCATTGACCACAAGATAGGTAACACAAAAGGTGATAAGCTGAGACAGGATCAAGAAGAGGGGAGCAGTTTTGTTGATACAAAGATTGGCTTAATACCGGAAATGATAGATAAAACAAAAGAAGATTATCCAGTACAGGATAAGGCACAAATGCAGAGAAGCTGTCATGAGAATTTACCAGACAGCTGTCAAGGTGAAATTGTTTTAGAGAATTCAAAGTTCTTTTCATGCTCTATTTGCAAAAGTAGGCGTCCAAACATTGCATGGACAAAAGACTATTCTTATGATGAACTCCAAAAAGCTACAACAGGATTTTCAGTTGAGAACTCTCTATCAGAAAGGGAGAATGGACCTACTTTTGAAGGCCAGCTAGAGAGACGGGTGAAAATAGTTGTTAAGAAATATGAAATTACTACACCACATGAAAAGAAGATACTAAAATCAGAAAGCACAGCTACTCATCAGGGAAGTTTCCAGTCATTGACTTGGAAGCAAAGGCTGAAAGTACCCATGGGTACTGCCAGAGTTTTAAAGTTCCTACATGGAAATAACATAATTCATGGAAATATAAAACCAAGTAACATTCTTCTAACACATGACTTTGAACCACTGATTGGAGATTTTGGCATTGGAAAAGTGAAGCTTGGACCAAAGAAATGCAGCAAAGATAAATGTGTGAAAAATTTTGGATATACAACACCTGAGTATCTGGAGAACGGGAAACTATCAAATAAGACAGATGTATTCTCCTTTGGAGTGATTCTTTTAGAGCTGATTACGGGCCGGAGGGCTATGGACAAATTACCAGGTGGAAAAAACCTTGTTGGTTGGGCAAGGCCACTATTGGGCGGAAGGAAGTACGCACAGTTGGTGGATTTGAAAATCTGTAACTCCTATGAAGAAGAGAAACTTCAATGGTTTTTTCAAGTAACAGAACAATGTCTGAGAAAGAATCCTAAGGAGAGATATACGATGAATATGGTTGTATCTGCATTGCAAGGCATAGTAGAATCAGATGAGCATTGTGAAACTCAAAATCCTTCCCCAGAAAACTCATATTTACCACATGGTGATCCTACAATGATTAGTACACAAGTTAAAACCAATGACATGGCCAAGCAGAGAAATGTAGATCAGCTAATACAGGGTGGAGAAGATGTGAAGAGTGGCCCGGATGATGAGATATTAGGAGCAACAGTTATCAACAATGACATTATTGATCAAATAAACCATGACCAACAAATCCAGGAAAAACAGCACATTAAGGGAACCTTCCACATAGAAGAAATGGGAAAAGAAGTAGATAAGCAACAAAAGTGTTGGCGTCCAAACAGTTGTTTGCAAAAGAAATATACTTATGAAGAACTTCAAGCCGCTACAGAAGGATTTTCCATTAAGTATTCCCTATATCAGGGAGAATATGGACCTGCTTTCAGAGGAGAGCTAGAGAATAACCAGGAAATAGTTATTAAAGCAACATGTATTCTCAAGCTTACAGGAACAGAAGAATTTCAATTGCTAATAAACATGAGACATGAAAATGTGAGAATGTTGTTGGGGTCATGTATACGATTAAGTCAATTGTTGGTCGTATATGAGAAGGCATGCAATGGTTCACTTGACCACTACTTACCAAGTTTGAAGACTATGTACATGAACTTAGTAAAAAGGAAAATTCTGAATCATGCAGGAAAAAATGGTAGATCATTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTTGCCAGAGGTCTAAAATATCTACATGAGAGAACGATAGTACATGGAGGAATAAAACCGAAGCTGATCACCGGTCGTGTGATTTCAGATAAAAGATCAGGACAGAAAAGCCTTAATGAATGTGTCATGTCACTTCTTGAACAAAGAAAGCATCTACGGTTGGTGGATCCCGAAGTCAACAGCTCCTATGATGAACCAGAACTTGTATCATTATTCCACGTAGCAAAAAATTTCCTGAGAAAGAATCCAAAGGAAAGATTCACAATGAAGATGGTTGTCTCTGCTCTACCATGTGTAGTAGATAGCAATGACATCTGCCTAAAGGAAATCTTTCCACTAGAAAACTCAAATGTTTCAGAAGTAACAAAGGTCAAAAAATGA 2463 0.3857 VVSELQGIAGSELCHMTDDITPLISDSRIVLDINGSQGTKVTNEGPQISPRNSDKLSQIEEQMQSRQKGEERISGKMIINDQEMDQTVVDQLSEFEEQVPTTLNREGITTQNISIDHKIGNTKGDKLRQDQEEGSSFVDTKIGLIPEMIDKTKEDYPVQDKAQMQRSCHENLPDSCQGEIVLENSKFFSCSICKSRRPNIAWTKDYSYDELQKATTGFSVENSLSERENGPTFEGQLERRVKIVVKKYEITTPHEKKILKSESTATHQGSFQSLTWKQRLKVPMGTARVLKFLHGNNIIHGNIKPSNILLTHDFEPLIGDFGIGKVKLGPKKCSKDKCVKNFGYTTPEYLENGKLSNKTDVFSFGVILLELITGRRAMDKLPGGKNLVGWARPLLGGRKYAQLVDLKICNSYEEEKLQWFFQVTEQCLRKNPKERYTMNMVVSALQGIVESDEHCETQNPSPENSYLPHGDPTMISTQVKTNDMAKQRNVDQLIQGGEDVKSGPDDEILGATVINNDIIDQINHDQQIQEKQHIKGTFHIEEMGKEVDKQQKCWRPNSCLQKKYTYEELQAATEGFSIKYSLYQGEYGPAFRGELENNQEIVIKATCILKLTGTEEFQLLINMRHENVRMLLGSCIRLSQLLVVYEKACNGSLDHYLPSLKTMYMNLVKRKILNHAGKNGRSLTWGERVKVAIGVARGLKYLHERTIVHGGIKPKLITGRVISDKRSGQKSLNECVMSLLEQRKHLRLVDPEVNSSYDEPELVSLFHVAKNFLRKNPKERFTMKMVVSALPCVVDSNDICLKEIFPLENSNVSEVTKVKK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00887 820 SMART serkin_6 218 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00887 820 Gene3D Transferase(Phosphotransferase) domain 1 257 466 - -
Pste3g00887 820 Gene3D Transferase(Phosphotransferase) domain 1 717 803 - -
Pste3g00887 820 ProSiteProfiles Protein kinase domain profile. 113 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00887 820 Pfam Protein tyrosine and serine/threonine kinase 580 712 IPR001245 GO:0004672|GO:0006468
Pste3g00887 820 SUPERFAMILY Protein kinase-like (PK-like) 266 463 IPR011009 -
Pste3g00887 820 PANTHER OS01G0253100 PROTEIN 148 256 - -
Pste3g00887 820 Gene3D Phosphorylase Kinase; domain 1 537 646 - -
Pste3g00887 820 ProSiteProfiles Protein kinase domain profile. 576 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00887 820 SUPERFAMILY Protein kinase-like (PK-like) 557 788 IPR011009 -
Pste3g00887 820 Gene3D Transferase(Phosphotransferase) domain 1 650 716 - -
Pste3g00887 820 Pfam Protein kinase domain 279 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00887 Pste-Chr3 5524011 5533548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00887 551 713 Trihelix Transcription Factor Family AT5G38560 31.579 3.51e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste3g00887 Pkinase 1.3e-21 CL0016