Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00882 ATGGAATTTCTACCCATCTTCTCCTCCATTTCCCTGTTATTGTGTTTGGTTATGTGGCAAGGAAGTGCTGAACCTGCTGAAGATAAGGAGGCTTTGCTTGACTTTGTGAAAAAGTTCCCTCCTTCTAGGCCTCTGAATTGGAATGAGAGTTCCCCCATGTGTGATTCTTGGACCGGAGTTACCTGCAATGAAGACAAGTCCAAAGTAATTGCAATTAGGTTGCCAGGGGTTGGATTTCATGGCAGTATTCCTCCTGATACTATTAGCCGCCTCTCAGCACTGCAAACTCTTAGCCTCAGATCCAATGTGATAAGTGGGCCTTTTCCTTCCGACTTTTCCAATCTTAAGAACTTGTCTTTTCTCTATATTCAGTTCAACAACTTGTCTGGTCCTTTGCCTGATTTCTCAGCCTGGAAGAACCTCACTGTTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATCCCTTCCTCCCTTAACAACTTGACTCAGCTTGCTGGCTTGAACCTTGCAAACAATTCTCTTTCTGGAGAAATTCCTGATCTCAGCCTCACAAGATTACAAGTGCTGAATTTATCCAACAACAAATTGCAGGGCAGTGTGCCTAAGTCCTTGTTGACGTTTCCTGAGTCGGCATTCTCTGGGAATAACATTTCTTTTGGGACTTCTCCTGCCCTTTCTCCAGTGCGTCAACCATCGTATGAACCGGCTTCGAAATCTAGGAAGCGCGGAAGGCTCAGCGAAGCAGCGCTGTTGGGAGTTGTTGCTGCTGCTGCTGTTTTAGGCGTTGTGGCTTTTGTTTCTTTGATGTTCGTGTGTTTCTCAAGAAGAGATGATGAGGATGAGGAAACCTTCAGTCGGAAGTTGCACAAGGGAGAAATGTCTCCTGAGAAAGCGGTTTCAAGGAACCAGGATGCCAATAATAAGCTGGTTTTCTTTGAGGGGTGTAATTATGCCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACGTTTGGAACTGCCTACAAAGCAATACTAGAGGATGCAACCACGGTTGTTGTGAAGAGGTTAAAAGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAGCACATGGAGATTGTAGGAAGTCTTAAGCATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAACTCATGGTATATGATTACTACAGTCAGGGCAGCATCTCTTCCATGTTACATGGCAAAAGAGGTGAGGATAGGGTGCCTTTAGATTGGGATACTCGACTGAAAATAGCCTTAGGTGCTGCAAGAGGCATTGCTCGTATCCATGTTGCGAATGGTGGCAAACTTGTACATGGCAACATCAAATCCTCAAACATCTTTCTCAATACCAAACAGTATGGCTGTGTGTCTGACCTAGGACTGGCAACCATATCAAGCTCACTTGCCTTACCAATATCACGAGCAGCTGGTTACCGGGCACCCGAAGTGACAGATACCAGAAAAGCAGCACAACCCTCAGATGTTTACAGCTTTGGCGTGGTGTTGCTAGAGCTGTTGACTGCGAAATCCCCTATCCACACAACTGGTGGTGATGAGATTATCCACCTTGTGAGGTGGGTTCATTCAGTTGTGCGTGAGGAGTGGACAGCTGAAGTGTTTGATTTGGAACTGATGAGATATCCAAACATAGAAGAAGAGATGGTTGAAATGTTACAGATAGCCATGTCATGTGTGGTGAGGATGCCTGATCAGAGGCCTAAGATGTCTGAAGTTGTAAAGATGATAGAAAATGTGAGGCAGATTGATGCAGAGACTCACTCATCATCTGGGAACCAATCAGAACAACTTAAATTTTCTCAACGTGACAATGGTAACTCTCCTTCCACTCCCTCCTCCTACTTCCCTAGAGGAAGTGAATGA 1920 0.4484 MEFLPIFSSISLLLCLVMWQGSAEPAEDKEALLDFVKKFPPSRPLNWNESSPMCDSWTGVTCNEDKSKVIAIRLPGVGFHGSIPPDTISRLSALQTLSLRSNVISGPFPSDFSNLKNLSFLYIQFNNLSGPLPDFSAWKNLTVVNLSNNHFNGSIPSSLNNLTQLAGLNLANNSLSGEIPDLSLTRLQVLNLSNNKLQGSVPKSLLTFPESAFSGNNISFGTSPALSPVRQPSYEPASKSRKRGRLSEAALLGVVAAAAVLGVVAFVSLMFVCFSRRDDEDEETFSRKLHKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYYSQGSISSMLHGKRGEDRVPLDWDTRLKIALGAARGIARIHVANGGKLVHGNIKSSNIFLNTKQYGCVSDLGLATISSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTAKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETHSSSGNQSEQLKFSQRDNGNSPSTPSSYFPRGSE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00882 639 Pfam Leucine rich repeat 82 128 IPR001611 GO:0005515
Pste3g00882 639 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Pste3g00882 639 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Pste3g00882 639 Gene3D Ribonuclease Inhibitor 137 226 IPR032675 -
Pste3g00882 639 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Pste3g00882 639 Gene3D Transferase(Phosphotransferase) domain 1 403 624 - -
Pste3g00882 639 FunFam Probable inactive receptor kinase RLK902 25 183 - -
Pste3g00882 639 Gene3D Phosphorylase Kinase; domain 1 293 401 - -
Pste3g00882 639 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00882 639 FunFam pollen receptor-like kinase 1 296 401 - -
Pste3g00882 639 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 402 609 - -
Pste3g00882 639 PANTHER OS05G0588300 PROTEIN 6 609 - -
Pste3g00882 639 MobiDBLite consensus disorder prediction 602 639 - -
Pste3g00882 639 ProSitePatterns Protein kinases ATP-binding region signature. 333 364 IPR017441 GO:0005524
Pste3g00882 639 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00882 639 SUPERFAMILY L domain-like 38 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00882 Pste-Chr3 5481436 5484518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00882 17 631 Receptor kinase-like Gene Family AT4G23740 64.172 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste3g00882 Pkinase 8.4e-34 CL0016