Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00879 GAAAGCTCCAGACCATTGACCTGGATTGAAAGGAAGAGTGTGGCCATAGGCCTTGCTAGTGGTCTCAAATACCTACATGAAAATAATGTTGTTCATTGCAATATAAAACCAAGTAATATTCTTCTAACACATGACTTCAAAGCACTGATTGGAGATTTCAGCTTTGGCAAAGAACTTGAATTGAAGTCCTACAAAAATAAAAACAAAGGGAATCATGAATACATAGCACCAGAATACCAGGAGAAGGGGAAATTATCAACTAAGACAGATGTTTACTCATTTGGTGTGGTTATTTTAGAGTTGATCACTGGGCGAAGGACTACAGATATGATGTCAGAAGATAAAAGCCTTGTCGAATGGGCAAAGCCACTTCTGAAAAGAAAGAACTACTCAGAATTGGTAGATCCCATAATCAGAAACACATATGAAGAGGATCACCTCCGTTGGCTGGTCCAAGTAACAACACAATGTCTAAAAAGTAATCCTAAGGAAAGATTTTCAATGAATATGGTTGTTTCTGCATTACAAGGCATAGCAGACAGTGAACTCTGCCACATGACAGACGATATTACTCCACTTATATCAGATTCAAGAATTGTGCTAGATATAAATGGCTCACAAGGTCCAACAACAACAAAAGCTGATCAGCCAAGTCAGGAAGAGGACAGAAAAAAGTTAATACTAACAGTTGAGAATAATAGCTTTTATAAGATAAGCCCGAGAAATTTTGATAACCTGAGCCAGATTGAAGAACAGATGCAGAGCATACAAAAAGGGGAGGAGAGGATCTCAGGAAAGATGATAATCAATGACCAAGAAATGGATCAGACAGTAGTTGATCAGCTGAGTGATTTTGAAGAACAGGTGCCAAGCACCCTCAATAGAGAGGGCATCACAACACAGAACATTAGCATTGACCACATGATAGGTAACACAAAAGGTGATCAGCTGAGACAGGATCAAGAAGAGGGGAGCAGTTTTGTTGATACAAAGATTGGCTTAATACCGGAAATGATAGATAAAATAAAAGAAGATTATGCAGTACAGGATAAAGCACAAATGCAGAGAAGCTGTCATGAGAATTTACCAGACAGATGTCAAGGTGAAATTGTTTTAGAGAATTCAAAGTTCTCTGCATGCTCTATTTGCAAAAGTAGGCGTCCAAACGTTGCATGGACAAAAGGCTATTCTTATGATGAACTCCAAAAAGCTACAGCAGGATTTTCAGTTGAGAACTCTCTATCTGAGAGTGAGAATGGACCTACTTTTGAAGATACTAGAAATAAAAATGTGGCGATGCTGTTGGGGTTTTGTACAAATAAAAGCCAAATGTTGATAGTGTATGAGCAAGTATGCAACGGTTCACTTGATCAGTACCTAACAAAGGGAAGTTTCCAGTCATTGACTTGGAAGCAAAGGCTGAAAGTAGCAATGGGTACCGCCAGAGGTTTAAAGTTCCTACATGGAAATAACATAATTCATGGAAATATAAAACCAAGTAACATTCTTCTAACACATGACTTTGAACCACTGATTGGAGATTTTGGCATTGGAAAAGTGAAGCTTGGACCAAAGAAATGCAGCAAAGATAAATGTGTGAAAAATTTTGGATATACAGCACCTGAGTATCTGGAGAACGGCAAACTATCAAATAAGACAGATGTATTCTCCTTTGGAGTGATTCTTTTAGAGTTGATTACGGGCCGGAGGGCTATGGACAAATTACCAGGTGGAAAAAGCCTTGTTGGTTGGGCAAGGCCACTACTGGGTGGAAAAAAGTACGCACAGTTGGTGGATTTGAAAATCTATAACTCCTATGAAGAAGAGAAACTTCAATGGTTGGTTCAAGTAACAGAACAATGTCTGAGAAAGAATCCTAAGGAAAGATTTACGATGAATATGGGAATAAATAAACTTACGGTTGTATCTGCATTGCAAGGCATAGTAGAATCAGATGAGCATTGTGAAACTGAAGATTCTTCCCCAGAAAACTCATATTTACCACATGGTGATCCTTCAATGATTAGTACACAAGGTCAAATGATGGCTGGTCTAGTGAATCAAAAACAAGAATGGATTGACAGAAACCAATATGAGGTGGAAAGAAGCCAAAGATTAACAGTCAAAACCAATGACATGGCCAAGCAGAGAAATCAGCTAATACAGGGTGGAGAAGATGTGAAAAGTGGCCCGGATGATGAGATATTAGGAGCAACAGCTATCAACAATGACATTATTGATCAGATAAACCATGACCAACAAATCCAAGAAAAACAGCACATTAAGGGAACCTTCCACATAGAAGAAATGGGAAAAGAAGTAGATAAGCAACAAGAGTCTTCAGCATGCTCAATTTGCAAGTGTAGGCGTCCAAACAGTTGTTTGCAAAAGAAATATACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCCGTTAAGTATTCCCTATCTGAGGGAGAATATGGACCTGCTTTCAGAGGAGAGCTAGAGAATAACCAGGAAATAGTTATTAAGCAACATGCATTCTCAAGCTTACAGGAACAGAAAGTGTTTATGTCAGAATTTCAATTGCTAATAAACGTGAGACATGAAAATGTGATCATGCTGTTGGGGTCATGTATACGATTAAGTCAATTGCTGGTTGTATATGAGAAGGCATGCAATGGTTCACTTGACGACTACTTACCAAGAAAAAATGGTAGATCATTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTTGCCAGAGGTCTAAAATATCTACATGAGAGAAATATAGTACATGGAGGCATAAAACCG 2805 0.385 ESSRPLTWIERKSVAIGLASGLKYLHENNVVHCNIKPSNILLTHDFKALIGDFSFGKELELKSYKNKNKGNHEYIAPEYQEKGKLSTKTDVYSFGVVILELITGRRTTDMMSEDKSLVEWAKPLLKRKNYSELVDPIIRNTYEEDHLRWLVQVTTQCLKSNPKERFSMNMVVSALQGIADSELCHMTDDITPLISDSRIVLDINGSQGPTTTKADQPSQEEDRKKLILTVENNSFYKISPRNFDNLSQIEEQMQSIQKGEERISGKMIINDQEMDQTVVDQLSDFEEQVPSTLNREGITTQNISIDHMIGNTKGDQLRQDQEEGSSFVDTKIGLIPEMIDKIKEDYAVQDKAQMQRSCHENLPDRCQGEIVLENSKFSACSICKSRRPNVAWTKGYSYDELQKATAGFSVENSLSESENGPTFEDTRNKNVAMLLGFCTNKSQMLIVYEQVCNGSLDQYLTKGSFQSLTWKQRLKVAMGTARGLKFLHGNNIIHGNIKPSNILLTHDFEPLIGDFGIGKVKLGPKKCSKDKCVKNFGYTAPEYLENGKLSNKTDVFSFGVILLELITGRRAMDKLPGGKSLVGWARPLLGGKKYAQLVDLKIYNSYEEEKLQWLVQVTEQCLRKNPKERFTMNMGINKLTVVSALQGIVESDEHCETEDSSPENSYLPHGDPSMISTQGQMMAGLVNQKQEWIDRNQYEVERSQRLTVKTNDMAKQRNQLIQGGEDVKSGPDDEILGATAINNDIIDQINHDQQIQEKQHIKGTFHIEEMGKEVDKQQESSACSICKCRRPNSCLQKKYTYEELQAATEGFSVKYSLSEGEYGPAFRGELENNQEIVIKQHAFSSLQEQKVFMSEFQLLINVRHENVIMLLGSCIRLSQLLVVYEKACNGSLDDYLPRKNGRSLTWGERVKVAIGVARGLKYLHERNIVHGGIKP 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00879 935 PANTHER OS01G0253100 PROTEIN 425 653 - -
Pste3g00879 935 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 188 - -
Pste3g00879 935 ProSiteProfiles Protein kinase domain profile. 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00879 935 Pfam Protein tyrosine and serine/threonine kinase 814 931 IPR001245 GO:0004672|GO:0006468
Pste3g00879 935 Pfam Protein tyrosine and serine/threonine kinase 423 634 IPR001245 GO:0004672|GO:0006468
Pste3g00879 935 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00879 935 Gene3D Phosphorylase Kinase; domain 1 769 885 - -
Pste3g00879 935 SMART serkin_6 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00879 935 ProSiteProfiles Protein kinase domain profile. 811 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00879 935 SUPERFAMILY Protein kinase-like (PK-like) 792 935 IPR011009 -
Pste3g00879 935 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 451 651 - -
Pste3g00879 935 Pfam Protein kinase domain 10 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00879 935 FunFam Proline-rich receptor-like protein kinase PERK8 773 886 - -
Pste3g00879 935 SUPERFAMILY Protein kinase-like (PK-like) 3 195 IPR011009 -
Pste3g00879 935 Gene3D Transferase(Phosphotransferase) domain 1 1 194 - -
Pste3g00879 935 Gene3D Transferase(Phosphotransferase) domain 1 451 661 - -
Pste3g00879 935 Gene3D Transferase(Phosphotransferase) domain 1 888 935 - -
Pste3g00879 935 SUPERFAMILY Protein kinase-like (PK-like) 427 635 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00879 Pste-Chr3 5454961 5463021 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00879 799 934 Trihelix Transcription Factor Family AT5G38560 35.971 3.33e-21 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pste3g00879 PK_Tyr_Ser-Thr 2.2e-33 CL0016