Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00871 AGACTTGGAAAGAAAAATATCCCTTTATTCACTTGTAAATTGTAACTCAATTAGGGTTTGTTCATCATATAAATATAAATATCAATTATGAAACAAAACCTCTTATCATTCTAACTTTTCCAAACCCAAGCAGCCTTCTAACCCTGTCACTCTCTCCAAAATGGCCATTACCTTCTCAAATCTCCACACAGAGTCAGGTCTCAAGTCTCTCGAGGGCTTCCTTTCTGGAAAGACCTATATTTCTGGGGATCAGCTCACAAAGGATGACATCAAAGTGTACGCTGCCGTTTTGGAGAAGCCAGGTGACGCTTTTCCCAATGTTGCCAAGTGGTACGAGGTTGTCTCATCTCACCTTGCTAAAAGCTTCCCTGGCAATGCTCAAGGGGTGAGATTCTGTGGCAAAGCACCTGCTTCAGCTGAGGCTGCTCCTGCAAAACCGGCTGCTTCTGCTGCTGATGATGACGATGATCTTGATCTCTTTGGCGATGAAACAGAGGAAGACAAAAAGGCAGCAGAGGAAAGGGAGGCTGCTAAGAAGTCTGCTAAGAAGAAAGAGAGTGGCAAATCTTCTGTTCTGCTCGATGTTAAGCCATGGGATGATGAGACAGACATGAAGAAGCTAGAGGAGGCTATCATGTTAACCATTGTCGATGACCTTGTATCTGTGGACACTCTTATTGAGGAGCATCTGACAGTTGAGCCCCGCAACGAGTATATCCAAAGCTGTGACATCGTTGCATTCAACAAAATTTAA 754 0.439 MAITFSNLHTESGLKSLEGFLSGKTYISGDQLTKDDIKVYAAVLEKPGDAFPNVAKWYEVVSSHLAKSFPGNAQGVRFCGKAPASAEAAPAKPAASAADDDDDLDLFGDETEEDKKAAEEREAAKKSAKKKESGKSSVLLDVKPWDDETDMKKLEEAIMLTIVDDLVSVDTLIEEHLTVEPRNEYIQSCDIVAFNKI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00871 197 Gene3D - 159 197 IPR014717 -
Pste3g00871 197 Gene3D - 128 158 IPR014717 -
Pste3g00871 197 SMART EF1_GNE_2 135 197 IPR014038 GO:0003746|GO:0006414
Pste3g00871 197 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 158 197 - -
Pste3g00871 197 SUPERFAMILY GST C-terminal domain-like 10 64 IPR036282 -
Pste3g00871 197 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 100 108 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pste3g00871 197 SUPERFAMILY eEF-1beta-like 132 197 IPR036219 -
Pste3g00871 197 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 186 197 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pste3g00871 197 Pfam EF-1 guanine nucleotide exchange domain 137 158 IPR014038 GO:0003746|GO:0006414
Pste3g00871 197 Pfam EF-1 guanine nucleotide exchange domain 158 197 IPR014038 GO:0003746|GO:0006414
Pste3g00871 197 Gene3D - 6 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00871 Pste-Chr3 5413650 5416776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00871 1 197 Eukaryotic Initiation Factors Gene Family AT5G12110 64.912 2.95e-85 249