Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00867 ATGGCGAGAAGAACAAAACTTTTGAGTTTGTTATCAACCCTAAAGGTAGCATTTCAAAACCCTCACAACCCCTTTTCGAAGACCCTTAGGGTTTCTTACGGAACCCTAGCACCATCGAAACTCCCCGAATACGAGATGCCCTCGGTGACGTGGGGCGTGATCCAGGGTCGCAAGGAGAAGCTCGTTTCGCGCGTTATCATCTTTGACTACCTCAAGGGTTTGGGAATCATCCCCGATGAGTTGCACGATCTTGAGCTTCCCTCCACCGTTGATGTCATGCGCGAGCGCGTCGAGTTTCTCATGAAATTGGGTCTCACCGTGGACCACATCAACGACTACCCTTTGATCTTAGGGTGCAGTGTCAGAAAAAACGTGATCCCTGTTCTGGGGTACTTGGAAAAAGTTGGGATTTCAAGGTCCAAGCTTGGGGAGTTTGTTAAGAGTTACCCTCAGGTGTTGCATGCCAGTGTCATTGTTGAGCTTGTTCCTGTTGTTAAGTTCCTCAGGGGGCTTGATGTGGAGAAAGATGATATTGGGTATGTCTTGCAAAAGTACCCTGAGCTTCTTGGATTCAAGCTTGAGGGTACTATGAGTACTTCAGTGGCTTATCTTGTTAGTATTGGTGTGAACCCTAGGGATATTGGTCCAATGGTCACTCAGTATCCTTATTTTTTAGGGATGAGAGTTGGGACTGTGATAAAGCCCATGATTGATTACTTGGTCCATTTGGGGTTGCCAAAGAAGGTTTTGGCTAGGATGTTGGAGAAGAGAGCTTATATTCTTGGTTATGATCTTGAGGAAACTGTGAAACCGAATGTGGAGTGTTTGATTAGTTTTGGTGTGAAGAGGGAGTGTTTGGCTTCGGTTATTGCGCAGTATCCGCAGATTCTTGGTTTGCCTCTTAAGGCTAAGTTGTCTTCCCAACAGTACTTTTTCAGTTTGAAGCTTAAGGTTGATCCTGAAGGGTTTGCTCGCGTGGTGGAGAAGATGCCGCAGGTGGTTAGCCTCCACCAGCATGTGATTATGAAGCCAGTTGAGTTCCTCCTTGGGAGGATGCTACCGGCGCAGGACGTAGCGAGTATGGTGGTCAGGTGTCCTCAGTTGATGGCTCTGAGAGTGGAGCTCATGAAGAACAGCTATTACTTCTTCAAGACTGAGATGGGACGACCCTTGAACGAGCTTGTGGAATTCCCGGAGTACTTTACGTATAGTTTGGAGTCCAGGATCAAACCCAGATACCAGAGGCTGAAGAGTAAAGGGATAAGGTGTTCCTTGAATTGGATGCTCAATTGTAGTGACCAGAGGTTTGAAGAGAGGTTGCAGGGTCATTACATTGAAACTGAAAGTGTAGGTCCCACATTCTTTATGGGAGGGAGATTAGACCTACCGAGGAACAGCATAGTGTCAGATGAGGAAGAGGAGAGTGATGATGAAGTATTATACAGACAAACTGTTTTGACCCATCGTGCAGGATCAGCTGTTATGCTCTCACTTATATACTCAGAGTTTCTAATAAAGCTTCAGTTGTGGAGCCTCTTGTATTTTGATGCTCAATTTTTTTTCCCACTTGATGCCCTTACCCTTCCCACAGGCTATCATAAGCAGAAAAGCAAGGAGTCAGACCAAGCTCACATAATGACTTCATGA 1647 0.4602 MARRTKLLSLLSTLKVAFQNPHNPFSKTLRVSYGTLAPSKLPEYEMPSVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELHDLELPSTVDVMRERVEFLMKLGLTVDHINDYPLILGCSVRKNVIPVLGYLEKVGISRSKLGEFVKSYPQVLHASVIVELVPVVKFLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTVIKPMIDYLVHLGLPKKVLARMLEKRAYILGYDLEETVKPNVECLISFGVKRECLASVIAQYPQILGLPLKAKLSSQQYFFSLKLKVDPEGFARVVEKMPQVVSLHQHVIMKPVEFLLGRMLPAQDVASMVVRCPQLMALRVELMKNSYYFFKTEMGRPLNELVEFPEYFTYSLESRIKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGHYIETESVGPTFFMGGRLDLPRNSIVSDEEEESDDEVLYRQTVLTHRAGSAVMLSLIYSEFLIKLQLWSLLYFDAQFFFPLDALTLPTGYHKQKSKESDQAHIMTS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00867 548 Pfam mTERF 129 437 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 Gene3D Transcription termination factor 3, mitochondrial 91 232 IPR038538 -
Pste3g00867 548 Gene3D Transcription termination factor 3, mitochondrial 233 447 IPR038538 -
Pste3g00867 548 FunFam Transcription termination factor mterf4, chloroplastic 93 230 - -
Pste3g00867 548 PANTHER CGI-12 PROTEIN-RELATED 128 259 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 324 354 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 359 390 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 391 422 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 287 319 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Pste3g00867 548 FunFam Transcription termination factor MTERF4, chloroplastic 231 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00867 Pste-Chr3 5409410 5411931 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste3g00867 mTERF 3.7e-108 No_clan