Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00850 AAAAAAATACACCTTACCTCACTAGGATTTTCTCCCTTAGCCTCCAACGACGACAAACCACTCAATCCTAAGAAATCCATTAGATATTTCAAGTCTTGTTCTGGCTTCGTCCATGTTCATTGTTTACTATACCTCACCACTCAAAGGGTCTCATAAATTTCTTCAGCTTCCAACTGTGCTGCAGAAAAAGAAACTATTGGTTTTAGATACTAGTGCATTTCCCGAGTAGAGAAGCGAGGCAATTGTGCATGAGATAAACATCAAGCACCACCATCCGCGATCATTGTCACTATTATAAACAATACAAAATGGAGAGTGATTGGAGCTGGGAGCATAATACACTCATCAATGAGCTAATTCAGGGGATGGAGGTAGCAAGGAAGTTGAAGGAAGACTTGAGAATGCCATATTCGGTTGACACAAGAGATTTGCTGGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACTGATTCTACGAAGTAATGCATCAACTTCCGAGTTGCAGGCCATGAGTCAGACAACAACAGCTTTGTTACCAGAGTCCCCATTGTCTGTTCATGGAAGTCCTCTGCACGAGGATGCTGATGGGGGCATCAAGGATCACAAGGAAGTTAAACATCATTCAAAGAAAAGAAAGATAACGCCCAAATGGATGGATCAAGTAAGAGTGAGCTGTGAGAGTGGTCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAGTACGGACAGAAAGACATCCTTGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTCCGCAACACTCAGGGCTGTTGGGCAACAAAGCAAGTGCAGAGATCAGATGAAGATCCCACAATATTTGACATAACTTACAAAGGAAAGCATACCTGTTCTCAGGGAAACAATGCCATTCTGCCACCTAAGTCAGCAAACAAACAAGTGAAACCACACAGTAACATTGACATTCACCATGCACAGGCATCACAGGAATATCTTGCAAAGTTCAGAAACACCTTGTCTGTCAGCACTGATAAAGTGGACAACGGAGATATGGCATATCCGTTCACTTTCCCTTCAACTTCATTTGGATCCATGAAACAAGAGAACCTCAGCTTGATTCCTTTTGCCCTAGAGAATCAGTCCTTCCTGAGCGACCTATACCAAACACACCTGTTATCTCCAACAACACCTGAATCAAACTATTTCCCATCTCCAACTTTCCAGATGGATGGGTTTGATGGGATTTACAATAAGCTGCATTCAGAATCGGATATCAATGAAATCATTTCCACCAACACTTCAGCAACCAATTCTCCGATACCTGAATTCAATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCATTCAATACCCCAGGATTTTTCTCCTGACTGTACTATAAACGGAATGCTATCCCCATATAGTCTTCCTAAAATAGGACAAGTTGAGACAGCAGTAGAATTGTAGAATAAAGAATGAGCAACTGCAGCACTTATGAATGTCCTTGTAGTGAATATCAGAATTACAATTTTGGCACTGTTTAGTAATTAGCAGCGTGTACTTTCAAATTAATTGGTGCTCCAAAATTGCATTGCTATAACCTACAAGCTACGTCTTAGTAGAAGAGCATAGCACACTCAAAGAAGAATAAACGTACAAGATTGCATCATCATGTAAAAAAAAAAGAATAAGAATGATAAGATAATTAAAGGGAGATATAAAAAATTGCAGATGAAAATTGCATAGGGTGAGGAAAACTCTGTAAGATTTGATTGGAAAGGACGATTTAGTAAGAAAAATAGGAAGCATGGATATCCATTATATTTAGCAAAAGAAGGAGAGGGCGGAATGATAGATGATAGAATAGCAAGAACAGAATGAGATGAAAGATGAAGGCGGGATGGGATGCGAGGAGAGTTGTTGTTCTAGTCGCGGAAGGGTGAGTCGGAGTTAGGAGTGGAAGCATTATGATGTTTTCTGAGAGCCTGTCTGAGACCCAACACAATGAACAAGTTGGTGAGAGTGAGCAGGGACTCGGCCCCGCCGTGTAACCAGTCCACATTGGACAAAGAAGTCCCATAATGCACCTTGGCTGTGTAACACAAATGAGACACATAAATCTAGTTTATTTATTTATAAGGGCAACGAAATTGAACATGATAGACAACAACTCACCGTAGATTCCAGCGGGTACTGCTCAATAAAAAGAAAAGTAGAGTTAAAAAGAGAGAGAGAGAGGGAGGAAGGAAGAGGAGAGAGAGAGAAACTGACTAGTGGCAGCAACGAAGAGGAGCAAGAAATAGAAGCCGAAGAGGGTGAGATTTGGGGCGGTCTTGGACTTGGTAATGAAGTACAAGAAACCGATGTAGGGGAAGAGGGAAAAGGCGAAGAGCTGAGAAGCGATGCTCTGGGAGTCAATGGTGGGTGCCCAGGGATCAACCGGCAATGGCAACTGCATGCACACCATTCCTCTTCTTCTCTCACTCTCACGCTTGGGCTTAGGCTTGGGCTTCCATTCCCACCTTCTTGTGTTCAGCAAAAACCTTCTTCCAGGGACAGGGAGGGACAGGGGCACTGACAAGTTAATACTAATAATACCACCA 2603 0.4214 MESDWSWEHNTLINELIQGMEVARKLKEDLRMPYSVDTRDLLVQRILSSYEKALLILRSNASTSELQAMSQTTTALLPESPLSVHGSPLHEDADGGIKDHKEVKHHSKKRKITPKWMDQVRVSCESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYKGKHTCSQGNNAILPPKSANKQVKPHSNIDIHHAQASQEYLAKFRNTLSVSTDKVDNGDMAYPFTFPSTSFGSMKQENLSLIPFALENQSFLSDLYQTHLLSPTTPESNYFPSPTFQMDGFDGIYNKLHSESDINEIISTNTSATNSPIPEFNFSLDPVEIDPNFPFNTPGFFS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00850 360 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g00850 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 259 IPR044810 GO:0003700
Pste3g00850 360 FunFam WRKY transcription factor 53 118 195 - -
Pste3g00850 360 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g00850 360 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g00850 360 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g00850 360 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00850 Pste-Chr3 5298087 5300893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00850 6 263 WRKY Transcription Factor Family AT4G23810 42.958 1.11e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g00850 WRKY 7.1e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01901 1 5895806 5897599 Pste3g00850 3 5298087 5300893 PCT