Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00829 ATGAAATGGAAGAGGCCCAGGCCCACGGTCCACGACACGGTTTGGGCTTCCAGTGGAATAAGAGAGACTCTAGGGTTAGGGTTTATGAAGGCATCACATTTCATTTTCGTTTGCGCCTCTGTTCTCTGTCACAGCCGTAACAATGGTGATTACTCATTCCTTCTTCTCTGCTTTTTGGCTTACCCTAAGCAAATCCATGAGATTAAGGACTTCCTTCTCACTGCCAGAAGGAAGGACGCCAGGTCTGTGAAGATCAAGAGGAGCAGAGATGTGGTCAAGTTCAAGGTCAGATGCTCCAAGTACCTCTACACACTTTGTGTGTTTGATCCAGAGAAAGCTGACAAACTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTAAAGGTACCGTGTGAGAGAGACCAAGACGAAGCAATTGATAGATTCTTCTTAAGTTTGTTTTTCTGTTGTTTTGTTCTGTTTTGGGAAATTAAACTTGAATTTATGTCTGATGGAATGTTTTGGTACCATAGAACTATATATATGAGCTTAATGTCTGCTTTTTTTGGTATCTTCAATTAGGCTACAAGACTACAATTATCAATTAAATGTTCAATTTTGTACCACTATTTTTTGTATTTTCCATAATTATCAATTATGGCGGAGTAAATCTCTCCGAAGCTAAGCTTTCAATTAAATGATTTATATATGTGACGGG 705 0.3972 MKWKRPRPTVHDTVWASSGIRETLGLGFMKASHFIFVCASVLCHSRNNGDYSFLLLCFLAYPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00829 129 Pfam Ribosomal L38e protein family 62 128 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pste3g00829 129 Gene3D - 61 129 IPR038464 -
Pste3g00829 129 PANTHER 60S RIBOSOMAL PROTEIN L38 62 128 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pste3g00829 129 FunFam 60S ribosomal protein L38 61 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00829 Pste-Chr3 5102906 5104695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00829 62 129 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.118 5.62e-42 131