Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00789 ATGGTTGTGAAGGTATATGATACCATTGGAAACAATAAAGTTGAAGACGATTCATTTGTCAGAGATGATGACTGGTCCATTGAAGGGAAGAATAACACACTGTCTTTTCCATCTTATTACATTGATGAAAATGCAGTTATTTGCTTGGATGGAGATGGCTGCAAGGTTCGCAATGGGTTGGCTACTATTGAAGGAGATTCTGATATTGATACATCAATAGCCTGTGATTCATGTGACATATGGTATCATGCTTTCTGTGTGGGATTTGATACTGAAAGTACATCAGACAGTTCATGGCTATGCCCAAGATGTGTGGTTGATGAAGTTTCTAAGGGAACATCCAATTCAACAGACAGGACAACTGTGGAATGTAATGCAAACAATAGTAGCAGTGAATGCCATACTGAGGATTCCTTTTCAGGAAAAGTGTCTGTGTCTGTTGCTGATACAGGAGAGACAGCTGTTGTTGTCTCGATGGTTGACCGAACAAAATGTGTTCCAGAAACAAATGAGAAAAGCCTATTACCTTTTGAAGTTGGTGGTGATCCAATGACTGAATCATGTATTTTAATGTCTGACTCAAATAATCAGCAAAGTGGGGAAGTGAAAGCAAATACATTACCCATCATGGAGGAAGAAGAACTGGAACTGTCTTTGTCAAACAACATATCCTGTAGCCTAACTTCTAAATCCTTGGTGCATAATGATTTAAAGAAAAGTGCCAGTGGAGCAAGGAATGAACCCAGTGGCTCTGAAGGAACTATGTTGTTTGATGAGTCCCATAACAAAACTAGTCCATCCAGAATTGAATCTGATATGGGTCTTCATCTTGGTTTGTCAGTGGGCTCTTTTTTATCTGTTGATAATGCAGACAAGAATGAAACAAAAGATCAAGCAACTGGTGTCCTGTGCTTGAGTTCAGAAGAATGTTTTTTGAAAGGGGATGAGATTGAAGCCAATGCTTGTAAGGACAATGCTAGAGTGGCTGGTGGAAAGAGAAAACATGGTGATTACAGTAATAAGCAAGTTCATGTAAAGGCTGAGCATGGAGATTCCAAGCCTGAACTTCCAGATGAAGTTGCACCAAAGAAAATTAGAACTACTGGTGGTCAAATGAGTGGTACTAGTGACTCAGCTGATGCTTGTCTTTTAGAAAATGCTCAGAAACTCCCTGCTTTAAAACATTCTCCTACAAAAGCCATTGCCAAACCAGATATAATGAATATAGTTAAAGGGACAAACCGGAGGCTTTGCAAGGAACATACTGGCACTAATGCTTGTGACAAGTTGTCTGAAAAGAAAGAAAATGTGGCTGGGTTGAGGGTTAAGAAAATCATGAAGAGAGTTTCTGATAATGGAGAATCATCCTTGGTAGTTCAAAATCTAAGGAAGGAAATTAGAGAAGCTGTCCGTAACAAATCCTCTATAAACTTTGAGGATAACCATTTTGATCCCAAGCTTCTTGAAGCATTTAGAGCTGCCATAACAGGGCCTAAAACTGACCTTGTAAACAAGTTATCTCCTGCAGCTATAAAGTCAAAGAAGTCAATGTTGCAGAAAGGAAAAGTGCGGGAACATCTAACAAAGAAAATTTTTGGGACTTCCAATGGAAGAAGAAAGCGTGCATGGGATAGGGACTGTGAAATTGAATTTTGGAAATATCGTTGCATGAGAGCTACGAAGCCTGAAAAGGTTGAAACTTTAAAATCAGTTCTTGATCTACTGAGAAAAGGTTCAGACAGTCCTGAATCAAAGGAAGCTTCCAAATGTCAGGCCAAGAATCCTATTCTTTCCAGGTTATATTTAGCAGATACATCTGTTTTCCCCCGGAAAGAGGATGTCAAACCTCTCTCGGTGCTTAAAACCATTGCTAACTCCGAGCAAACCAAACAAAACCCATCAGAGAAGGGACAAAATCTATCTGTCAATAGCAATTCTATTAAAGCAACAGATGTAAGTAATCTTTTATCTAAGACCAGCAGTTTTTCAGCTGAAAGAAAAGTAGATAAGAAGGTTGTACGTGGTCCAGTTGCTGATAATTCAACTTCTGGTAAAGTACATTTAAACAATCACACAGAAAGGACATCAGTTTTGTCAGCTGGTACCAAAACTAGCACAAAGGAGTCAGGCCTTACATCTGGCTATATGAAGAGTGATAAAAGAAAATGGGCCTTGGAGGTTCTTGCGAGGAAAACTGCTGTCACAAGCGGAAACACAGCAAATGGAAATCAGGAAGACAATGCAATTTTTAAAGGAAATTATCCTTTGCTTGCCCAATTGCCAATTGATATGAGACCAGCATTGGCCCCTTGTCGCCACAATAAAATTCCTATATCAGTGAGGCAGACACAGCTTTACCGCCTGACTGAGCGCTTACTAAGGAACACAAATTTGGCTGTGATTAGCAGAACAGCAGATACAGAATTAGCTGTTGCAGATGCAATTAATATTGAAAAAGAGGTTGCTGACAGATCAAACAGCAAGCTTGTGTATTTGAACCTTTGTTCCCAAGAGCTCTTGCATCGCACAAATAACACAAAAACCAATGCAGCCATAGATACAAGTCCACCAGCCTCATCAGCAATGATTACTGATCAACAACCGGAGTTAAATACTGATGATGTTTCAACTGACCCAGAAGTTGAAACTGCCTTGAAAAATGCTGGTCTGTTGTCCGATTCCCCACCTAGCAGTCCACATGTGAACAGTGAAACATGTAATGGTGATATGTCGGGACCTGATAACATACTTGAACTGGATTCTCATCCTGATCTTGATATTTATGGTGATTTTGAGTATGATTTGGAAGATGAAGATTATATCGGGGCTAGTGTTACTAAGATCTCAAACGCAAAACAAGAGCAAAATGAGTCAAAAGTGAAACTTGTTTTCTCCACCATGAACTTGAAAAAGTCAGATATCACTTTGGATATAGCAGACTGTGAAGGGTCTGAAGGAAATGAAGTGCCAGGAGATGCATCCTGCTCACCAAATTGTCACAATGATACAGTCCTTAGGGATAGGGCTTCTAGAATTGATACAGAGATGGGCCAGCCTTCTGTTTCTTCTGAGCTCCTACCCGATGAGGGTATTGTTGAGCCACTAGACTCTGAATTTGACGAATTATATGGCCCAGACAAGGAACCACTTGTAAAAAAATTTCCAGACTGTGAATCAAGTTCATTACATGGAGATGACACGAAAGAAACTCTAAGCATGACCAATGACTGCCTTAACGACGAACAACATGTCTTGGACAATGCAGTAAATACTTCAGAACTGGGGAATGAGAATCTCACAGAAAAAGTTTCTGTTACCACCATCACTGGCAAATCTTCTGATATATCTGGGGCTGGTGAAAATTTCCAGAGGAAGGAAGAGAAATCCAATGTCATTGCTAAACAGACTGACTCCGGAAATCTTGTAACCAAAAAGGTAGAAGCTTACATCAAGGAGCACATCAGACCACTGTGCAAGAGTGGTGTAATCACGGCTGATCAATACAGGTGGGTTGTTGCAAAAACGACTGAGAAGGTTATGAAGTATCATTGCAAAGCAAAGAATGCTAATTTTCTGATAAAGGAAGGTGAGAAAGTAAAGAAACTTGCAGAGCAGTATGCCGAAGCAGCCCAACAGAACAGAAAAAATTAATTCATGTGGGTATCATTTCATCCTCAACAAGTTTTCTTTAGTTATTGCCCGTTATCCGCCTTGGTTTTTATTATGGTGCAAATCTTGCTTATTAACAAACTTGATTTATTGGGCAGCTGTGAGGAATGTTAGATTTAGTCTCACTTGGTCATTTTTATGTGAATTGAGCACACAATCGGGATTCAGTGTCGAGAATTTGCTAAATTAGTTTGAAAGAAATTTTATAAAAATGATTTTAACTAAAATTCATATTGAAGTATTTATACTATGT 3922 0.3934 MVVKVYDTIGNNKVEDDSFVRDDDWSIEGKNNTLSFPSYYIDENAVICLDGDGCKVRNGLATIEGDSDIDTSIACDSCDIWYHAFCVGFDTESTSDSSWLCPRCVVDEVSKGTSNSTDRTTVECNANNSSSECHTEDSFSGKVSVSVADTGETAVVVSMVDRTKCVPETNEKSLLPFEVGGDPMTESCILMSDSNNQQSGEVKANTLPIMEEEELELSLSNNISCSLTSKSLVHNDLKKSASGARNEPSGSEGTMLFDESHNKTSPSRIESDMGLHLGLSVGSFLSVDNADKNETKDQATGVLCLSSEECFLKGDEIEANACKDNARVAGGKRKHGDYSNKQVHVKAEHGDSKPELPDEVAPKKIRTTGGQMSGTSDSADACLLENAQKLPALKHSPTKAIAKPDIMNIVKGTNRRLCKEHTGTNACDKLSEKKENVAGLRVKKIMKRVSDNGESSLVVQNLRKEIREAVRNKSSINFEDNHFDPKLLEAFRAAITGPKTDLVNKLSPAAIKSKKSMLQKGKVREHLTKKIFGTSNGRRKRAWDRDCEIEFWKYRCMRATKPEKVETLKSVLDLLRKGSDSPESKEASKCQAKNPILSRLYLADTSVFPRKEDVKPLSVLKTIANSEQTKQNPSEKGQNLSVNSNSIKATDVSNLLSKTSSFSAERKVDKKVVRGPVADNSTSGKVHLNNHTERTSVLSAGTKTSTKESGLTSGYMKSDKRKWALEVLARKTAVTSGNTANGNQEDNAIFKGNYPLLAQLPIDMRPALAPCRHNKIPISVRQTQLYRLTERLLRNTNLAVISRTADTELAVADAINIEKEVADRSNSKLVYLNLCSQELLHRTNNTKTNAAIDTSPPASSAMITDQQPELNTDDVSTDPEVETALKNAGLLSDSPPSSPHVNSETCNGDMSGPDNILELDSHPDLDIYGDFEYDLEDEDYIGASVTKISNAKQEQNESKVKLVFSTMNLKKSDITLDIADCEGSEGNEVPGDASCSPNCHNDTVLRDRASRIDTEMGQPSVSSELLPDEGIVEPLDSEFDELYGPDKEPLVKKFPDCESSSLHGDDTKETLSMTNDCLNDEQHVLDNAVNTSELGNENLTEKVSVTTITGKSSDISGAGENFQRKEEKSNVIAKQTDSGNLVTKKVEAYIKEHIRPLCKSGVITADQYRWVVAKTTEKVMKYHCKAKNANFLIKEGEKVKKLAEQYAEAAQQNRKN 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00789 1216 Coils Coil 459 479 - -
Pste3g00789 1216 SMART PHD_3 53 105 IPR001965 -
Pste3g00789 1216 MobiDBLite consensus disorder prediction 238 262 - -
Pste3g00789 1216 PANTHER RING FINGER PROTEIN 41, 151 36 1206 - -
Pste3g00789 1216 MobiDBLite consensus disorder prediction 625 645 - -
Pste3g00789 1216 Pfam PHD-finger 70 105 IPR019787 -
Pste3g00789 1216 MobiDBLite consensus disorder prediction 847 912 - -
Pste3g00789 1216 MobiDBLite consensus disorder prediction 890 910 - -
Pste3g00789 1216 MobiDBLite consensus disorder prediction 238 270 - -
Pste3g00789 1216 ProSiteProfiles Zinc finger PHD-type profile. 45 107 IPR019787 -
Pste3g00789 1216 SUPERFAMILY FYVE/PHD zinc finger 68 107 IPR011011 -
Pste3g00789 1216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 105 IPR013083 -
Pste3g00789 1216 MobiDBLite consensus disorder prediction 847 878 - -
Pste3g00789 1216 Coils Coil 1199 1216 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste3g00789 PHD 2.1e-08 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00789 3 4877535 4895495 Pste3g00789 3 4877535 4895495 ECH