Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00746 AAAGACAAAAACAAGGAAAAGAAGAAAAGGAACATTGTTACATCCTTAGTAGCAATGGTAGAGAAGGACCAAAATTCATTATTGCACTCCCAAAAAGAAATATATTTATACTCAAATGTCCTTGAAATCACCAATAATTTCAATACAATTATAGGAAAAGGTGGATTTGGAATAGTTTATCTAGGCTATATCAATGAAACTCTAGTTGCAGTGAAAATACTTTCTTCATCGTCTTCTCATGGTTATCCACAATTTCAAGTAGGGGTCAAACTTCTAATGAGAGTTCATCACAAAAATTTGACCTCCCTTATAGGTTATTGTAATGAAGGAACCAATAAGGATCTCATATATGAATACATGGCTAATGGAAACTTGCAAGAACATCTCTTTGGTAAACACAGCACAATAAAAACATTAACTCAGGAAGACAGACTTCATGTAGCAGTGGATGTAGCCTTAGGATTGAAGTATCTACAAAATGGTTATAAGCCACCTATAATCCATAGAGATATAAAATCTACAAACGTATTGTTGAATGAACACTTCCAATCAAAATTATCTGATTTTGGTCTATCAAAAAGTATCCCAACAAACGGATGCACTTATCTATCAACTATTACCCTAAGAGATTACCTATATTATATTGCCTTATTTTTATCCATAATTTCTCTTGGAAAATACCATGATCCTATATGGATATTTACGTCCACAAATAGTGACAAAATAAATTACGTTTCATTTTTTTTTCTTGTTGGTACTTCAGAACTAATAATAACAAGTCAACAAGTTATAACAAATAATTCAGAAAAGATTCACATAACAATAGAAATAACATCAATTTGTGTGTCTCCAAATTCTAACATAAGGCCTATCATAAGTGTGATAGTGACTAAACTAAAGGAGTCTCCAGTAACGGAATTAGATCAAACTGAATTGGTCAACATGAATCTGAATATCAAATTTATTCCTCAAGCCAAGTAA 981 0.314 KDKNKEKKKRNIVTSLVAMVEKDQNSLLHSQKEIYLYSNVLEITNNFNTIIGKGGFGIVYLGYINETLVAVKILSSSSSHGYPQFQVGVKLLMRVHHKNLTSLIGYCNEGTNKDLIYEYMANGNLQEHLFGKHSTIKTLTQEDRLHVAVDVALGLKYLQNGYKPPIIHRDIKSTNVLLNEHFQSKLSDFGLSKSIPTNGCTYLSTITLRDYLYYIALFLSIISLGKYHDPIWIFTSTNSDKINYVSFFFLVGTSELIITSQQVITNNSEKIHITIEITSICVSPNSNIRPIISVIVTKLKESPVTELDQTELVNMNLNIKFIPQAK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00746 326 PANTHER OS07G0107800 PROTEIN-RELATED 16 302 - -
Pste3g00746 326 Gene3D Phosphorylase Kinase; domain 1 27 119 - -
Pste3g00746 326 SMART serkin_6 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00746 326 SUPERFAMILY Protein kinase-like (PK-like) 27 216 IPR011009 -
Pste3g00746 326 PIRSF ILK 262 311 - -
Pste3g00746 326 PIRSF ILK 16 214 - -
Pste3g00746 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pste3g00746 326 ProSitePatterns Protein kinases ATP-binding region signature. 51 72 IPR017441 GO:0005524
Pste3g00746 326 Gene3D Transferase(Phosphotransferase) domain 1 120 220 - -
Pste3g00746 326 ProSiteProfiles Protein kinase domain profile. 45 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00746 326 Pfam Protein tyrosine and serine/threonine kinase 47 197 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00746 Pste-Chr3 4671031 4672513 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00746 22 326 Receptor kinase-like Gene Family AT2G28970 40.401 5.44e-71 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste3g00746 PK_Tyr_Ser-Thr 9.1e-30 CL0016