Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00710 AAATGCTAATAATGGTGCAGTCACTTCAGTGTTTCTTCTTCTGGCTCATTTCCATGTTATCTATACAAGGCACCCTTACTATTACTCCAAATGAATCAATCCAAGGCAATAGGACCATGGTTTCTGCAGGTCGAACTTTTGAAGCAGGATTCTTCAACTTGGGAAATTTACAAGGCCAATACTTTGGTATATGGTACAAGAACATATTACCAAGGACTATTGTGTGGGTGGCTAATAGAGATGCCCCAGTGAAAAACTCAACAGCATTTCTTACACTAACAGATCAAGGAGATCCTATAATCCTTGATGGCTCAAGGAATATTGTGTGGTTCTCCAACTCATCAAGAATTGCTGAGAAACCAATCATGCAGCTTTTGGACTCAGGAAACCTTGTTGTGAAAGATGGAAACAGCATACAGAATTTTTTGTGGGAAAGTTTTGATTATCCTGGTGACACTTTCCTTGCAGGAATGAAGCTTAGGACAAACTTAGTTACTGGTCCTTATAGGTCTCTCATATCTTGGAAAAACCCTGAAGATCCTGGTTCTGGTGAGTTTTCATATCACATAGATGCTCATGGCTTTCCTCAACTGGTTACTACAAAGGGAGAAAGGTTTTACAGCAGAGGAGGGTCATGGAATGGCTTTGTTTTCGGTGGAGTTTCGTGGAGAAGAATTGTTAGAATTTTCAAATTTTCTCTAGAGATTACTGAGAAGGAAATCATTTACCATTATGAAAACTTGAAGGCTGAAACTATTAGTAGGTTTGTGCTCAATCCAACAGGCTTTACACAACGTTTGATATGGACGAATAACCGAGGTTGGGAGATTATAACTACTCGTCCTATGGATCAGTGTGACTATTATGCCTTTTGTGATGACAATTCTGTGTGTAATATTAGTAACTCTCCAAAAATATGTGAATGCTTGAAAGGTTTTATTCCAAAATTCCCAGAAAAGTGGAATCCATTAGATGGATCTGGTGGGTGTGTTAGAAGAACAAACTTGAGTTGTGGTGGAGATGGGTTTCAGAAGTACATAGGAATGAAGTTGCCAGACACTTCTTCTTCTTGGTATAGCAGGAACTTGAGCCTTGAGATATGTGAGAAACTGTGTTTGGAAAACTGTTCTTGCACAGCATATGCACATATATATGAAGATGGGAGTGGGTGCTTGCTTTGGTTTGATAACATTGTGGACTTGACAAAACACACAGATCAAGGACAAGATATTTACACAAGACTTGCAGCTTCAGAGTTAGATCATAGAGGGGACAACACTGTCAAATTTTCCAACAAAAACAAGAAGCTTGCAGGGATAATAGTAGGCATTGTTGCATTCATCATGATAGTTGGATTAGTCACATTCTCATATATGAAGAGGAAGAATATCGCAAAGAGAGGGATAGTAAAAGCATTTCATCGCAAGTACAAAAGGGAGAAGGATGACGTGGAGTTATCTACAATATTTGACTTTGAAACCATCTCTAATGCCACAAATAACTTTTTAGACAGTAACAAGTTAGGAGAAGGTGGTTTTGGGCCAGTATACAAGGGTATATTTCAAGATGGGCAAGAGATTGCAGTCAAGAGGCTTTCAAAAACTTCTGATCAAGGAGCAGAACAGTTCAAAAATGAAACGAAGTTGATGGCAAAACTTCAGCACCGCAATCTTGTAAAACTCCTTGGTTGTTCTATTCACCAAAAAGAAAGACTCTTGATCTACGAATACATGTCCAACAGAAGCTTGGATTACTTTATTTTTGATTCAACTCAAAGAAGACAACTAGATCTGATGAAGCGCCTTCAGATTATTGATGGTATTGCTCGAGGGTTACTCTATCTTCATCAAGACTCTAGATTAAGAATAATCCATAGAGATCTCAAAGCCGGCAACATTCTTCTAGATAATGATATGAATCCAAAGATATCAGATTTTGGTTTGGCTAGAACATTTGGAGGAGATCAGGCTGAGGCCAATACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCACTGCATGGACATTTTTCAATCAAATCTGATGTATTTAGCTTTGGTGTACTTGTACTGGAGATAATTAGTGGGAGAAAGAATCGGGATTTTCATGACTCTCAGCATCATGTTAATTTCCTTAGTCATGCATGGAGATTGTGGATTGAAGAGAAGCCACTTGAACTGGTAGATGACCTATTAGATGATCCAAGCATTCCAAATGAAATACTGAGATGTATTCATGTGGGTCTACTATGTGTGCAGCATACACCAGAAAATAGACCAAACATGTCATCTGTGGTTTTAATGTTGAATGGTGAAAAGTTATTGCCTGAGCCAAGCCTACCTGGGTTCTACACAGGAACATATCAACATGCAATTCGGGTAGAATCTTCTACTACGAGAAGTTGTGGAGCTTGTTCACAAAATGAAGCTACAGTGTCGTTGTTAGAGGCACGATAAAAACCGTTGTGTTGATGATACAGGATTGACATTCCAATTGGAAGATCTCATTTGCAACATATTTGGACTTATCTTCTAACATAAAAGTGTAGCTATTTGACAGATGTATGAAAACAACTTATGATATATGACCACAAGTTATTTTTGTAGCTTATTAGAAGATAACTTCTGTAAAACATGTTTTCTTAAACAAAAG 2664 0.3803 MLIMVQSLQCFFFWLISMLSIQGTLTITPNESIQGNRTMVSAGRTFEAGFFNLGNLQGQYFGIWYKNILPRTIVWVANRDAPVKNSTAFLTLTDQGDPIILDGSRNIVWFSNSSRIAEKPIMQLLDSGNLVVKDGNSIQNFLWESFDYPGDTFLAGMKLRTNLVTGPYRSLISWKNPEDPGSGEFSYHIDAHGFPQLVTTKGERFYSRGGSWNGFVFGGVSWRRIVRIFKFSLEITEKEIIYHYENLKAETISRFVLNPTGFTQRLIWTNNRGWEIITTRPMDQCDYYAFCDDNSVCNISNSPKICECLKGFIPKFPEKWNPLDGSGGCVRRTNLSCGGDGFQKYIGMKLPDTSSSWYSRNLSLEICEKLCLENCSCTAYAHIYEDGSGCLLWFDNIVDLTKHTDQGQDIYTRLAASELDHRGDNTVKFSNKNKKLAGIIVGIVAFIMIVGLVTFSYMKRKNIAKRGIVKAFHRKYKREKDDVELSTIFDFETISNATNNFLDSNKLGEGGFGPVYKGIFQDGQEIAVKRLSKTSDQGAEQFKNETKLMAKLQHRNLVKLLGCSIHQKERLLIYEYMSNRSLDYFIFDSTQRRQLDLMKRLQIIDGIARGLLYLHQDSRLRIIHRDLKAGNILLDNDMNPKISDFGLARTFGGDQAEANTNRVMGTYGYMPPEYALHGHFSIKSDVFSFGVLVLEIISGRKNRDFHDSQHHVNFLSHAWRLWIEEKPLELVDDLLDDPSIPNEILRCIHVGLLCVQHTPENRPNMSSVVLMLNGEKLLPEPSLPGFYTGTYQHAIRVESSTTRSCGACSQNEATVSLLEAR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00710 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 576 - -
Pste3g00710 821 Pfam PAN-like domain 337 400 IPR003609 -
Pste3g00710 821 SUPERFAMILY Hairpin loop containing domain-like 340 411 - -
Pste3g00710 821 Pfam Protein tyrosine and serine/threonine kinase 505 769 IPR001245 GO:0004672|GO:0006468
Pste3g00710 821 SMART ntp_6 337 414 IPR003609 -
Pste3g00710 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Pste3g00710 821 CDD B_lectin 30 149 IPR001480 -
Pste3g00710 821 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00710 821 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pste3g00710 821 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Pste3g00710 821 SMART blect_4 30 149 IPR001480 -
Pste3g00710 821 Pfam D-mannose binding lectin 72 175 IPR001480 -
Pste3g00710 821 CDD TM_EGFR-like 436 465 - -
Pste3g00710 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 146 - -
Pste3g00710 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Pste3g00710 821 SMART serkin_6 501 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00710 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Pste3g00710 821 SUPERFAMILY Protein kinase-like (PK-like) 485 772 IPR011009 -
Pste3g00710 821 CDD PAN_AP_plant 333 415 - -
Pste3g00710 821 Gene3D - 21 146 IPR036426 -
Pste3g00710 821 Gene3D Transferase(Phosphotransferase) domain 1 577 778 - -
Pste3g00710 821 ProSiteProfiles PAN/Apple domain profile. 337 415 IPR003609 -
Pste3g00710 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 180 IPR036426 -
Pste3g00710 821 Gene3D Phosphorylase Kinase; domain 1 474 576 - -
Pste3g00710 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 763 - -
Pste3g00710 821 CDD STKc_IRAK 507 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00710 Pste-Chr3 4509730 4513651 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00710 423 800 Receptor kinase-like Gene Family AT4G23190 50.900 8.08e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g00710 PK_Tyr_Ser-Thr 8e-49 CL0016