Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00695 ATGAATAGAGGATTAGAATATCTGTATGAGCACTGTCACCCTGCAATGAAACATAGAGATATGAAATCTTCTAATATTGTCTTAGAAGAAAACTTCAATGCCAAGGTGTTAGATTTTGGTCTTGCCATAACTGGTGGGTCCCAAAGCAAGAAGAACATTAAACTATTGGGTACCATGGGATACGTAGCACTGGAGTATCTTCTAGAT 207 0.3768 MNRGLEYLYEHCHPAMKHRDMKSSNIVLEENFNAKVLDFGLAITGGSQSKKNIKLLGTMGYVALEYLLD 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00695 69 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
Pste3g00695 69 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00695 69 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Pste3g00695 69 Pfam Protein kinase domain 3 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00695 69 SUPERFAMILY Protein kinase-like (PK-like) 3 68 IPR011009 -
Pste3g00695 69 PANTHER OS01G0750732 PROTEIN 3 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00695 Pste-Chr3 4389352 4389668 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00695 3 68 Receptor kinase-like Gene Family AT3G58690 55.882 3.71e-19 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pste3g00695 Pkinase 8.1e-12 CL0016